Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0517
(829 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 145 4e-35
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 145 4e-35
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 145 4e-35
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 145 4e-35
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 93 2e-19
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 75 6e-14
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 57 2e-08
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 57 2e-08
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 37 0.019
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 37 0.019
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 36 0.025
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 36 0.025
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 35 0.057
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.31
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.31
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 32 0.40
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 30 1.6
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 30 1.6
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 30 2.2
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 30 2.2
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 30 2.2
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 3.8
At5g13650.2 68418.m01585 elongation factor family protein contai... 29 5.0
At5g13650.1 68418.m01584 elongation factor family protein contai... 29 5.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 145 bits (351), Expect = 4e-35
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = +1
Query: 256 KGSFKYAWVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAX 435
K SFKYAWVLDKLKAERE ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQA
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 436 XAVLIVAAGTGEFEAGISKNGXTR 507
AVLI+ + TG FEAGISK+G TR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGXLIYKCGGXXXXXXXXXXXXAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTG LIYK GG A EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEXPYSEPRF*GNSRKGKYPHTSKKIWLQTQLLSLFVP 689
HALLAFTLGVKQ+I NKMD+T YS+ R+ + + KK+ + FVP
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARY--DEIIKEVSSYLKKVGYNPDKIP-FVP 192
Query: 690 ISG 698
ISG
Sbjct: 193 ISG 195
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 145 bits (351), Expect = 4e-35
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = +1
Query: 256 KGSFKYAWVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAX 435
K SFKYAWVLDKLKAERE ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQA
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 436 XAVLIVAAGTGEFEAGISKNGXTR 507
AVLI+ + TG FEAGISK+G TR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGXLIYKCGGXXXXXXXXXXXXAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTG LIYK GG A EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEXPYSEPRF*GNSRKGKYPHTSKKIWLQTQLLSLFVP 689
HALLAFTLGVKQ+I NKMD+T YS+ R+ + + KK+ + FVP
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARY--DEIIKEVSSYLKKVGYNPDKIP-FVP 192
Query: 690 ISG 698
ISG
Sbjct: 193 ISG 195
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 145 bits (351), Expect = 4e-35
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = +1
Query: 256 KGSFKYAWVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAX 435
K SFKYAWVLDKLKAERE ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQA
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 436 XAVLIVAAGTGEFEAGISKNGXTR 507
AVLI+ + TG FEAGISK+G TR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGXLIYKCGGXXXXXXXXXXXXAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTG LIYK GG A EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEXPYSEPRF*GNSRKGKYPHTSKKIWLQTQLLSLFVP 689
HALLAFTLGVKQ+I NKMD+T YS+ R+ + + KK+ + FVP
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARY--DEIIKEVSSYLKKVGYNPDKIP-FVP 192
Query: 690 ISG 698
ISG
Sbjct: 193 ISG 195
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 145 bits (351), Expect = 4e-35
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = +1
Query: 256 KGSFKYAWVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAX 435
K SFKYAWVLDKLKAERE ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQA
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 436 XAVLIVAAGTGEFEAGISKNGXTR 507
AVLI+ + TG FEAGISK+G TR
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTR 134
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/51 (66%), Positives = 34/51 (66%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGXLIYKCGGXXXXXXXXXXXXAQEMVK 259
MGKEK HINIVVIGHVDSGKSTTTG LIYK GG A EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEXPYSEPRF*GNSRKGKYPHTSKKIWLQTQLLSLFVP 689
HALLAFTLGVKQ+I NKMD+T YS+ R+ + + KK+ + FVP
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARY--DEIIKEVSSYLKKVGYNPDKIP-FVP 192
Query: 690 ISG 698
ISG
Sbjct: 193 ISG 195
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 GKGSFKYAWVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 432
GKGSF YAW LD+ ERE IT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QA
Sbjct: 282 GKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQA 341
Query: 433 XXAVLIVAAGTGEFEAGISK-NGXTR 507
A+L++ A G FEAG G TR
Sbjct: 342 DAAILVIDASVGAFEAGFDNLKGQTR 367
Score = 36.7 bits (81), Expect = 0.019
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 122 THINIVVIGHVDSGKSTTTGXLIYKCG 202
+ +N+ ++GHVDSGKST +G L++ G
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLG 264
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 74.9 bits (176), Expect = 6e-14
Identities = 34/82 (41%), Positives = 51/82 (62%)
Frame = +1
Query: 262 SFKYAWVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXA 441
S+ A+++D + ER T+++ FET TI+DAPGH+ ++ NMI+G SQA
Sbjct: 147 SWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIG 206
Query: 442 VLIVAAGTGEFEAGISKNGXTR 507
VL+++A GEFE G + G TR
Sbjct: 207 VLVISARKGEFETGYERGGQTR 228
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 116 EKTHINIVVIGHVDSGKSTTTGXLIYKCG 202
+K H+N+V IGHVD+GKST G +++ G
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSG 126
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +3
Query: 510 HALLAFTLGVKQLIVGVNKMDSTEXPYSEPRF*GNSRKGKYPHTSKKIWLQTQLLSLFVP 689
H LA TLGV +LIV VNKMD +S+ R+ + + K K T+ +F+P
Sbjct: 230 HVQLAKTLGVSKLIVVVNKMDDPTVNWSKERY--DEIEQKMVPFLKASGYNTKKDVVFLP 287
Query: 690 ISGM 701
ISG+
Sbjct: 288 ISGL 291
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +1
Query: 283 LDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAG 462
+D ER ITI+ A ++ET + +D PGH D++KNMITG +Q A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 463 TG 468
G
Sbjct: 177 DG 178
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 104 KMGKEKTHINIVVIGHVDSGKSTTTGXL 187
K ++K H+NI IGHVD GK+T T L
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAAL 99
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +1
Query: 283 LDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAG 462
+DK E++ ITI A ++ET+K + +D PGH D++KNMITG +Q +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 463 TG 468
G
Sbjct: 165 DG 166
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 113 KEKTHINIVVIGHVDSGKSTTTGXL 187
+ K H+N+ IGHVD GK+T T +
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAI 87
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +1
Query: 283 LDKLKAEREVXITIDIALWKFET-------SKYYVTIIDAPGHRDFIKNMITGTSQAXXA 441
LDKL+ ER + + A +E S Y + +ID PGH DF + S A
Sbjct: 103 LDKLQRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGA 162
Query: 442 VLIVAAGTG 468
+L+V A G
Sbjct: 163 LLVVDAAQG 171
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 283 LDKLKAEREVXITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLI 450
LD + ERE ITI + + +E + + + +ID PGH DF + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 451 VAAGTG 468
V A G
Sbjct: 183 VDASQG 188
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 283 LDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAG 462
+D + ERE ITI A Y V IID PGH DF + A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 463 TG 468
G
Sbjct: 168 GG 169
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 283 LDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAG 462
+D + ERE ITI A Y V IID PGH DF + A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 463 TG 468
G
Sbjct: 168 GG 169
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 283 LDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAG 462
+D L E+ IT+ + + Y + +ID+PGH DF + T + A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 463 TG 468
G
Sbjct: 109 EG 110
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGXLIYKCGG 205
NI ++ HVD GK+T LI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 316 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAGTG 468
+ + + L + Y I+D PGH +F M A AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 316 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAGTG 468
+ + + L + Y I+D PGH +F M A AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGXLIYKCG 202
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 283 LDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDF 399
+D ++ E+E ITI A K+ + IID PGH DF
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDF 174
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 349 TSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAA 459
T + +V+ +D PGH + M+ G + A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 349 TSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAA 459
T + +V+ +D PGH + M+ G + A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 364 VTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAGTG 468
+T +D PGH F + G + VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 361 YVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAA 459
+V+ +D PGH + M+ G + A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +1
Query: 343 FETSKY----YVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAA 459
FE SK +V+ +D PGH + M+ G + A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGXLIYKCG 202
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 280 VLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDF 399
++D ERE ITI V IID PGH DF
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDF 159
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 280 VLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDF 399
++D ERE ITI V IID PGH DF
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDF 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,820,294
Number of Sequences: 28952
Number of extensions: 327128
Number of successful extensions: 834
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1902108000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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