BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0516
(737 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010110-1|AAQ22579.1| 372|Drosophila melanogaster GH04125p pro... 32 0.71
AE013599-255|AAF57408.2| 372|Drosophila melanogaster CG9456-PA ... 32 0.71
AJ251744-1|CAB63096.1| 372|Drosophila melanogaster serine prote... 32 0.94
BT001829-1|AAN71584.1| 450|Drosophila melanogaster RH45546p pro... 31 1.6
AY118758-1|AAM50618.1| 329|Drosophila melanogaster GH08778p pro... 31 1.6
AJ251745-1|CAB63097.1| 375|Drosophila melanogaster serine prote... 31 1.6
AE014296-3325|AAF49033.2| 450|Drosophila melanogaster CG6680-PB... 31 1.6
AE014296-3324|AAF49034.2| 450|Drosophila melanogaster CG6680-PA... 31 1.6
AE014134-1442|AAF52627.2| 375|Drosophila melanogaster CG8137-PA... 31 1.6
L05404-1|AAA28604.1| 471|Drosophila melanogaster hedgehog prote... 29 5.0
L02793-1|AAA16458.1| 471|Drosophila melanogaster hedgehog prote... 29 5.0
AJ245443-1|CAB56696.1| 393|Drosophila melanogaster serpin, puta... 29 5.0
AE014297-3280|ABC66186.1| 471|Drosophila melanogaster CG4637-PB... 29 5.0
AE014297-3279|AAF56102.1| 471|Drosophila melanogaster CG4637-PA... 29 5.0
AE013599-310|AAZ52824.1| 393|Drosophila melanogaster CG1865-PB,... 29 5.0
AE013599-309|AAF59287.1| 393|Drosophila melanogaster CG1865-PA,... 29 5.0
X04132-3|CAA27749.1| 455|Drosophila melanogaster protein ( Dros... 29 8.7
AY928609-1|AAX28842.1| 451|Drosophila melanogaster ORF2 protein. 29 8.7
>BT010110-1|AAQ22579.1| 372|Drosophila melanogaster GH04125p
protein.
Length = 372
Score = 32.3 bits (70), Expect = 0.71
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +1
Query: 130 TQTXTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILP 255
+++ T+ ++V+SP I T+++ + +GA G++ ++L A LP
Sbjct: 26 SKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP 67
>AE013599-255|AAF57408.2| 372|Drosophila melanogaster CG9456-PA
protein.
Length = 372
Score = 32.3 bits (70), Expect = 0.71
Identities = 13/42 (30%), Positives = 29/42 (69%)
Frame = +1
Query: 130 TQTXTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILP 255
+++ T+ ++V+SP I T+++ + +GA G++ ++L A LP
Sbjct: 26 SKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP 67
>AJ251744-1|CAB63096.1| 372|Drosophila melanogaster serine
proteinase inhibitor (serpin-1) protein.
Length = 372
Score = 31.9 bits (69), Expect = 0.94
Identities = 13/41 (31%), Positives = 28/41 (68%)
Frame = +1
Query: 133 QTXTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILP 255
++ T+ ++V+SP I T+++ + +GA G++ ++L A LP
Sbjct: 27 KSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP 67
>BT001829-1|AAN71584.1| 450|Drosophila melanogaster RH45546p
protein.
Length = 450
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 79 VDFSERPRNFSIELLYHTQTXTDG---HVVISPFGIWTLMTGIALGASGNSYRQLSRA 243
V S+ ++F+++LL + +ISPF +W+L+ + G+ G + QL ++
Sbjct: 70 VSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKS 127
>AY118758-1|AAM50618.1| 329|Drosophila melanogaster GH08778p
protein.
Length = 329
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 282 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSXPNSA- 458
YK L L+ +L N ++++ F L+P++ ++ F A + +D PN A
Sbjct: 31 YKDLLSK-LEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS 89
Query: 459 RIANTYIE-KSGGRVSNV 509
I N +++ ++ G++ ++
Sbjct: 90 SIVNNWVDNQTRGKIKDL 107
>AJ251745-1|CAB63097.1| 375|Drosophila melanogaster serine protease
inhibitor (serpin-2) protein.
Length = 375
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 282 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSXPNSA- 458
YK L L+ +L N ++++ F L+P++ ++ F A + +D PN A
Sbjct: 77 YKDLLSK-LEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS 135
Query: 459 RIANTYIE-KSGGRVSNV 509
I N +++ ++ G++ ++
Sbjct: 136 SIVNNWVDNQTRGKIKDL 153
>AE014296-3325|AAF49033.2| 450|Drosophila melanogaster CG6680-PB,
isoform B protein.
Length = 450
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 79 VDFSERPRNFSIELLYHTQTXTDG---HVVISPFGIWTLMTGIALGASGNSYRQLSRA 243
V S+ ++F+++LL + +ISPF +W+L+ + G+ G + QL ++
Sbjct: 70 VSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKS 127
>AE014296-3324|AAF49034.2| 450|Drosophila melanogaster CG6680-PA,
isoform A protein.
Length = 450
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 79 VDFSERPRNFSIELLYHTQTXTDG---HVVISPFGIWTLMTGIALGASGNSYRQLSRA 243
V S+ ++F+++LL + +ISPF +W+L+ + G+ G + QL ++
Sbjct: 70 VSISQGVQDFALDLLQRISVEVEKANKDFMISPFSVWSLLVLLYEGSEGETRNQLKKS 127
>AE014134-1442|AAF52627.2| 375|Drosophila melanogaster CG8137-PA
protein.
Length = 375
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 282 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSXPNSA- 458
YK L L+ +L N ++++ F L+P++ ++ F A + +D PN A
Sbjct: 77 YKDLLSK-LEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS 135
Query: 459 RIANTYIE-KSGGRVSNV 509
I N +++ ++ G++ ++
Sbjct: 136 SIVNNWVDNQTRGKIKDL 153
>L05404-1|AAA28604.1| 471|Drosophila melanogaster hedgehog protein
protein.
Length = 471
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 279 GYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKV 431
G S+ D VL TANG ++ S +F+D + + F L D GA + V
Sbjct: 276 GELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNF-VQLHTDGGAVLTV 325
>L02793-1|AAA16458.1| 471|Drosophila melanogaster hedgehog protein
protein.
Length = 471
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 279 GYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKV 431
G S+ D VL TANG ++ S +F+D + + F L D GA + V
Sbjct: 276 GELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNF-VQLHTDGGAVLTV 325
>AJ245443-1|CAB56696.1| 393|Drosophila melanogaster serpin,
putative protein.
Length = 393
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 345 NFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSXPNSARIAN----TYIEKSGGRVSNV 509
N ++++ + +FR Q+ F ++I LDF P + R A+ K+ G+++++
Sbjct: 110 NNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDI 168
>AE014297-3280|ABC66186.1| 471|Drosophila melanogaster CG4637-PB,
isoform B protein.
Length = 471
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 279 GYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKV 431
G S+ D VL TANG ++ S +F+D + + F L D GA + V
Sbjct: 276 GELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNF-VQLHTDGGAVLTV 325
>AE014297-3279|AAF56102.1| 471|Drosophila melanogaster CG4637-PA,
isoform A protein.
Length = 471
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 279 GYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKV 431
G S+ D VL TANG ++ S +F+D + + F L D GA + V
Sbjct: 276 GELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNF-VQLHTDGGAVLTV 325
>AE013599-310|AAZ52824.1| 393|Drosophila melanogaster CG1865-PB,
isoform B protein.
Length = 393
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 345 NFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSXPNSARIAN----TYIEKSGGRVSNV 509
N ++++ + +FR Q+ F ++I LDF P + R A+ K+ G+++++
Sbjct: 110 NNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDI 168
>AE013599-309|AAF59287.1| 393|Drosophila melanogaster CG1865-PA,
isoform A protein.
Length = 393
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 345 NFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSXPNSARIAN----TYIEKSGGRVSNV 509
N ++++ + +FR Q+ F ++I LDF P + R A+ K+ G+++++
Sbjct: 110 NNIYINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDI 168
>X04132-3|CAA27749.1| 455|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 455
Score = 28.7 bits (61), Expect = 8.7
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 446 PEFGSNSQHLHRKIRGTRLERLXSDDFQESXXILTNVISFKSLXGLPFNKSDTETXSP 619
PEF HL R I+ +L L F++ I VI K + G N D ET P
Sbjct: 180 PEFDGQKIHLQRFIKAIKLVDLAKGPFED---IAVEVIKSK-IVGTILNSVDNETTIP 233
>AY928609-1|AAX28842.1| 451|Drosophila melanogaster ORF2 protein.
Length = 451
Score = 28.7 bits (61), Expect = 8.7
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 446 PEFGSNSQHLHRKIRGTRLERLXSDDFQESXXILTNVISFKSLXGLPFNKSDTETXSP 619
PEF HL R I+ +L L F++ I VI K + G N D ET P
Sbjct: 176 PEFDGQKIHLQRFIKAIKLVDLAKGPFED---IAVEVIKSK-IVGTILNSVDNETTIP 229
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,242,296
Number of Sequences: 53049
Number of extensions: 582316
Number of successful extensions: 1474
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -