Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0516
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    46   3e-05
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    46   3e-05
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    40   0.001
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    40   0.001
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr...    30   2.0  

>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +3

Query: 270 LIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSXP 449
           L+E +  ++  V + T  GV +   N V+L   FT+ P F +T  K++GA  K LD + P
Sbjct: 63  LVEHFSFVSKEVKNGT-KGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTP 121

Query: 450 NSARIANTYIE-KSGGRVSNVXALTTSKN 533
            + +  N+++   + G++ N+    + K+
Sbjct: 122 AAVQEINSFVNTATNGKIKNIATQDSIKD 150


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +3

Query: 270 LIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSXP 449
           L+E +  ++  V + T  GV +   N V+L   FT+ P F +T  K++GA  K LD + P
Sbjct: 63  LVEHFSFVSKEVKNGT-KGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTP 121

Query: 450 NSARIANTYIE-KSGGRVSNVXALTTSKN 533
            + +  N+++   + G++ N+    + K+
Sbjct: 122 AAVQEINSFVNTATNGKIKNIATQDSIKD 150


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = +3

Query: 270 LIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFS-X 446
           + E +  L + V D T NGV     N VF++  +T+   +  T++K + AS + LDFS  
Sbjct: 60  IFEEFSGLMEAVGD-TDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQT 118

Query: 447 PNSARIANTYIEK-SGGRVSNVXALTTSKN 533
             +A+  NT++E  + G++ ++    ++ N
Sbjct: 119 EQAAKTMNTFVENHTNGKIKDLIPADSANN 148


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = +3

Query: 270 LIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFS-X 446
           + E +  L + V D T NGV     N VF++  +T+   +  T++K + AS + LDFS  
Sbjct: 60  IFEEFSGLMEAVGD-TDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQT 118

Query: 447 PNSARIANTYIEK-SGGRVSNVXALTTSKN 533
             +A+  NT++E  + G++ ++    ++ N
Sbjct: 119 EQAAKTMNTFVENHTNGKIKDLIPADSANN 148


>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical
           protein B0416.1 protein.
          Length = 1203

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 26/75 (34%), Positives = 35/75 (46%)
 Frame = +1

Query: 199 ALGASGNSYRQLSRAFILPKIRQRLSKGTNP*RTWCSIRPRTEYPWSAGTLSSWTTISPY 378
           ALG  G++  +  R  +LP    R     NP  T+ S  P T  P  A   SSWTT+ P 
Sbjct: 479 ALGHPGDAIGRTIRETVLP----RYPVDNNP-HTYYSYAPVTTTPIPA--TSSWTTVLPD 531

Query: 379 CRPSGRRSRRISVLR 423
             P G  + + SV +
Sbjct: 532 FGPFGVYNPKASVTK 546


>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical
           protein T01C4.1 protein.
          Length = 1484

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 248 FCQKSGNAYRRVQIPDGRGARSDRERSIPGQPELCLLGQR 367
           +C K GN   +V   D  G +   ER + G+  LC +G +
Sbjct: 657 YCTKDGNDCNQVDKGDAPGLKFLTERKVGGKFSLCAIGSK 696


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,913,742
Number of Sequences: 27780
Number of extensions: 297781
Number of successful extensions: 758
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)