Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0515
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 31 0.84
06_02_0203 + 12986685-12988691 30 1.1
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 1.5
03_02_1016 + 13228113-13228964 30 1.5
08_01_0434 + 3809681-3810016,3810039-3811100 29 1.9
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 29 2.6
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 2.6
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273... 28 4.5
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 28 5.9
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 5.9
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 5.9
10_08_0190 + 15607241-15607409,15607932-15607990,15608883-156089... 27 7.8
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 30.7 bits (66), Expect = 0.84
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 337 PPEPLGRXRTLRQDXDEAHDDGRXESTAPDRSYRSG*GKXQIPER 471
PP P GR R RQ + DG+ + D S RS G P++
Sbjct: 89 PPPPRGRRRVTRQFWNAGDYDGKPDLLGGDPSLRSDDGGGMDPDK 133
>06_02_0203 + 12986685-12988691
Length = 668
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 299 PLPDKDVVAAEKAHQNLLDGXEHFDKTQMKHTTT 400
P+P+ + +AA++AH N G EH K + TTT
Sbjct: 505 PVPNSNAIAADEAHGNATAG-EHDKKETAEQTTT 537
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 117 DLKSQLEGFNTSCLRDVDTNEKIVL 191
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>03_02_1016 + 13228113-13228964
Length = 283
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 268 AEAHRDSGEEPASGQRRCRSGESPPEPLGRXRTLRQDXDEAHD 396
A AH +G + A+ RRC SG P P R T HD
Sbjct: 216 ARAHASNGGKHAAA-RRCSSGNHQPVPRARSTTGMDSLGHGHD 257
>08_01_0434 + 3809681-3810016,3810039-3811100
Length = 465
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 274 AHRDSGEEPASGQRRCRSGESPPEPLGRXR 363
A GE G+RR R G SPPEP R R
Sbjct: 58 ASSGGGEAGERGRRRGRLGFSPPEPPARER 87
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 271 EAHRDSGEEPASGQRR--CRSGESPPEPLGRXRTLRQDXDEAHDDGRXESTAPD 426
E+ +SG+EP + + SG + P P + + D + DD ES+ D
Sbjct: 328 ESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESDEDDSSDESSDED 381
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 79 TLPP*KTSPRSPQT*RVSSKASTPAVSVTST 171
TLPP + SP SP T SSK TP+ S S+
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS 61
>09_04_0329 +
16726501-16726750,16726843-16726930,16727280-16727333,
16727590-16727739,16727884-16728015,16728279-16728423,
16728514-16728552,16728638-16728712,16728935-16728994,
16729120-16729184,16729519-16729609,16729806-16729820
Length = 387
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 350 RGSGGLSPLRQRLCPEAGSSPESRCASAG 264
RG+ G+ LR L P A +SP ++ A+ G
Sbjct: 56 RGAHGVRALRPLLLPRASASPSAKTAAGG 84
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 292 EEPASGQRRCRSGESPPEPLGRXRTLRQDXDEAHDD 399
E P+SG+ R PP+ GR + +R +DD
Sbjct: 675 ETPSSGKHRGTDVADPPKKRGRPKGVRSSNSSQNDD 710
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 93 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 185
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 93 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 185
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>10_08_0190 +
15607241-15607409,15607932-15607990,15608883-15608991,
15609394-15609551,15609976-15610044,15610158-15610847,
15611112-15611629,15611725-15611789,15613010-15613089,
15613894-15613998,15614768-15614881,15615029-15615168,
15615257-15615385,15615903-15616055,15616186-15616327
Length = 899
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -1
Query: 247 IPSNKDFWVFSVATSSADGSTIFSLVSTSRRQLVL 143
+PSN+ + ++ TSS++GS FSL +++ + L
Sbjct: 500 LPSNESWDYYASRTSSSNGSVYFSLQNSTNSDMDL 534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,933,950
Number of Sequences: 37544
Number of extensions: 250291
Number of successful extensions: 890
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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