Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0515
(565 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 53 1e-07
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.023
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 31 0.49
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 1.5
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 29 2.0
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 29 3.5
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 29 3.5
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 28 4.6
SB_45193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_29138| Best HMM Match : Albicidin_res (HMM E-Value=0.26) 28 4.6
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 27 8.0
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 27 8.0
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +2
Query: 266 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKHTTTEXXNPLPPIEAIEA 442
+L+H ET+EKN LP KD +A EK G E F K ++KH T NPLP + I A
Sbjct: 461 KLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRA 518
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +2
Query: 266 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKHTTTEXXNPLPPIEAIEAX 445
+LKH E QEKNPLP KD + E + FD +++KH TE NPLP + I
Sbjct: 690 KLKHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEEKNPLPDAKTIAQE 747
Query: 446 K 448
K
Sbjct: 748 K 748
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +2
Query: 266 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGXE--HFDKTQMKHTTTEXXNPLPPIEAIE 439
+LKH ET EKNPLPD + AE + L D E FD +++KH T+ +P + IE
Sbjct: 498 KLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIE 557
Query: 440 AXKXXNKFLNGIXNFDXTKAEAHXNVXKEPXXSQRT 547
A ++ + +FD +K + K P + +T
Sbjct: 558 AEAIDSR--AEVKSFDHSKLKHVVTQEKNPLPTPQT 591
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +2
Query: 266 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGXE--HFDKTQMKHTTTEXXNPLPPIEAIE 439
+LKH TQEKNPLP + E +N D E FD T++KH TT+ + +P E I+
Sbjct: 574 KLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIK 633
Query: 440 AXKXXNKFLNGIXNFDXTKAEAHXNVXKEPXXS 538
++ + +FD +K + V K P S
Sbjct: 634 EEAVDSR--AEVKSFDHSKLKHVETVEKNPLPS 664
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +2
Query: 266 QLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GXEHFDKTQMKHTTTEXXNPLPPIEAIE 439
+LKH ET EKNPLP V+ E + L D FD +++KH + NPLP + I
Sbjct: 650 KLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDIT 709
Query: 440 AXKXXNKFLNGIXNFDXTKAEAHXNVXKEPXXSQRT 547
+ + FD +K + K P +T
Sbjct: 710 TESTETR--AEVKTFDHSKLKHVQTEEKNPLPDAKT 743
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 269 LKHTETQEKNPLPDKDVVAAEKAHQNLLDGXE--HFDKTQMKHTTTEXXNPLPPIEAIEA 442
LKH +T+EKN LP + + E D E F+K++++H T+ N LP + I
Sbjct: 422 LKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIAD 481
Query: 443 XKXXNKFLNGIXNFDXTKAEAHXNVXKEP 529
K F +G+ F K + + K P
Sbjct: 482 EKRTAPF-SGVEVFQKNKLKHVETLEKNP 509
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 266 QLKHTETQEKNPLPDKDVVAAEKA 337
+LKH +T+EKNPLPD +A EKA
Sbjct: 726 KLKHVQTEEKNPLPDAKTIAQEKA 749
Score = 33.9 bits (74), Expect = 0.092
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +3
Query: 99 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
+P+V D +S++ F+TS L+ V+T EK+V+P+ + + E
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 99 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
+PK D +S++ F+ + L+ V T EK ++PS ED+ E
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 87 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 242
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 31.5 bits (68), Expect = 0.49
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 17 ESSIPFVIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 151
E S+PF N QN ++ +P R PQG H + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 69 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 215
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 281 ETQEKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
+T E++P DK A +LLDG FD+ + +H
Sbjct: 261 KTIEQDPTSDKSYKALRDTTHDLLDGLRDFDQAKEEH 297
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 281 ETQEKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
+T E++P +K A +LLDG +HF + + +H
Sbjct: 163 KTIEQDPSSEKSYQALRDTTHDLLDGLQHFGQAKEEH 199
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 281 ETQEKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
+T E++P +K A +LLDG +FD+ + +H
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEH 573
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 281 ETQEKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
+T E++P +K A +LLDG +FD+ +H
Sbjct: 567 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 603
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 281 ETQEKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
+T E++P +K A +LLDG +FD+ +H
Sbjct: 492 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 528
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 90 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 218
L DL +V +LKS+ EG CL D++ + DV E
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKE 1166
>SB_45193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 206 RCH*EDPEVFIRRYREVXSXQLKHTE-----TQEKNPLPDKDVVAAEKAHQNLLDGXEHF 370
+ H DP FIR Y E + E +E + D + VA K+ QN DG H
Sbjct: 220 KTHKSDPVAFIRGYHEYMTEWEPALEDVYKLMREPTNIKDPNAVAIRKSRQNGDDGDGHP 279
Query: 371 D 373
D
Sbjct: 280 D 280
>SB_29138| Best HMM Match : Albicidin_res (HMM E-Value=0.26)
Length = 172
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Frame = +2
Query: 206 RCH*EDPEVFIRRYREVXSXQLKHTE-----TQEKNPLPDKDVVA--AEKAHQNLLDGXE 364
+ H DP FIRRY E + E +E + D + VA EKA + ++DG
Sbjct: 20 KTHKSDPVAFIRRYHEYMTEWEPAIEDVYKLMREPTNIKDPNAVAIVREKADKTVMDGDG 79
Query: 365 H 367
H
Sbjct: 80 H 80
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/91 (30%), Positives = 33/91 (36%), Gaps = 10/91 (10%)
Frame = +1
Query: 235 YSTVSRSXFXPAEAHRDSGEEPASGQRRCRSGESPPE----PLGRXRTLRQDXDEAHDDG 402
YST R A+ P+ Q RSG S P T+ E +G
Sbjct: 415 YSTRRRKTLVRPRANSLFDRAPSDSQLSIRSGSSGSSTHSIPSIIGDTISLADQEPSGEG 474
Query: 403 RXE------STAPDRSYRSG*GKXQIPERHR 477
R + STA D SY SG G P HR
Sbjct: 475 RVQRSASIDSTASDSSYDSGSGPELSPNEHR 505
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +2
Query: 218 EDPEVFIRRYREVXSXQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKHTT 397
E VF +R R + TET+E NP D AE+ ++ +G T+ K T
Sbjct: 274 EGKSVF-KRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTN 332
Query: 398 TE 403
E
Sbjct: 333 ME 334
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 290 EKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
E++P +K A +LLDG +FD+ + +H
Sbjct: 75 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 108
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 290 EKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
E++P +K A +LLDG +FD+ + +H
Sbjct: 173 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 206
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 290 EKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
E++P +K A +LLDG +FD+ + +H
Sbjct: 222 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 255
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 290 EKNPLPDKDVVAAEKAHQNLLDGXEHFDKTQMKH 391
E++P +K A +LLDG +FD+ + +H
Sbjct: 320 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 353
>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 332 SPLRQRLCPEAGSSPESRCASAGSXQLLDTVE 237
SPL C SSP+S+C + S + D E
Sbjct: 62 SPLSPESCSIVHSSPDSQCTTPNSSMITDDCE 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,085
Number of Sequences: 59808
Number of extensions: 264520
Number of successful extensions: 872
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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