Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0514
         (493 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23171-1|AAC46702.2|  334|Caenorhabditis elegans Serpentine rece...    30   1.0  
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr...    28   3.2  
U23519-4|AAK31501.1|  358|Caenorhabditis elegans Toxin-regulated...    27   5.6  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm rec...    27   9.8  

>U23171-1|AAC46702.2|  334|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 55 protein.
          Length = 334

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +1

Query: 139 FLLRTTFIVKVTH*QLRLSE*QTAHVSNKSNLSQGRKMETKHLQKTLSYEFVCTSL*TMI 318
           F L T  +V   +    +S   T+ V +  N ++G  ++TK   KTL+Y   C +   +I
Sbjct: 191 FTLATLLLVIGAYAIPAISGFLTSRVIHLINDNRGMSLKTKEQSKTLAYGLACQTFLPVI 250

Query: 319 LVNYLKNCY 345
               + +CY
Sbjct: 251 CYIPVASCY 259


>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical
           protein F31C3.3 protein.
          Length = 2029

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 180 TITAVRVTDSSRQQQVEFISGSKNGNKTFAKNTFIRIRVYFPLDYDFSQLFEELLSLM 353
           TIT     D   Q +  F + S   NK +  +   +     P ++DF+Q+F+E L ++
Sbjct: 631 TITVQNSDDLMTQSRSAFATLSSATNKVWIWSAD-KFMFRLPFNFDFAQIFDEFLQII 687


>U23519-4|AAK31501.1|  358|Caenorhabditis elegans Toxin-regulated
           target of p38mapkprotein 2 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 96  NSLNKNKYVCRLFDISFAHNFHCQSHPLTITAVRVTDSSRQ 218
           N L K +Y  ++  I  AHNF   S+ + IT V +  SSR+
Sbjct: 292 NGLFKTEYSLKV-TIGRAHNFVLASYEVPITIVTMDQSSRR 331


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
           protein W02C12.1 protein.
          Length = 1372

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 165 DNESCAQKKCRTNG 124
           DN SCA K CR NG
Sbjct: 256 DNGSCAAKPCRNNG 269


>AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm
           receptor protein 82 protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 122 VPFVRHFFCAQLSLSKSPIDNYGC 193
           VP +  FFC  L +S  P  NY C
Sbjct: 267 VPMLILFFCPALHISTEPYTNYIC 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,215,944
Number of Sequences: 27780
Number of extensions: 176229
Number of successful extensions: 450
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)