Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0513
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            27   0.94 
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   2.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 556  IFVINNNH*ATMYYQLIRRILIIS--LGKSHWNLTHR 452
            +F+   NH  T YYQL  RI  +S  L +S   L H+
Sbjct: 3238 VFLSTVNHSRTFYYQLCERIAALSDELEESRHILQHK 3274


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 343 QENETVIRHKILDEFHKQFSFNSRHIQVKRQCQTLFSVL 227
           + NE +++  ILD   KQ  F     + K  C+++ S L
Sbjct: 438 RSNEQILKSMILDPRIKQLGFQDDVEKFKNICESIISEL 476


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,748
Number of Sequences: 2352
Number of extensions: 14517
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)