Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0511
         (726 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6I9T5 Cluster: MAB21L1 protein; n=47; Eumetazoa|Rep: M...   164   2e-39
UniRef50_Q60YZ0 Cluster: Putative uncharacterized protein CBG180...    97   5e-19
UniRef50_Q62A39 Cluster: Rhs element Vgr protein; n=15; Burkhold...    34   3.1  
UniRef50_A6GBJ8 Cluster: Rhs element Vgr family protein; n=1; Pl...    33   5.4  

>UniRef50_Q6I9T5 Cluster: MAB21L1 protein; n=47; Eumetazoa|Rep:
           MAB21L1 protein - Homo sapiens (Human)
          Length = 359

 Score =  164 bits (399), Expect = 2e-39
 Identities = 76/91 (83%), Positives = 83/91 (91%)
 Frame = +1

Query: 235 HRLQRQVDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEF 414
           + +  + +GLEV+SP EFE+V+YLNQMGV NFVDDGSLPGCAVLKLSDGRKRSMSLWVEF
Sbjct: 57  NEMDNRYEGLEVISPTEFEVVLYLNQMGVFNFVDDGSLPGCAVLKLSDGRKRSMSLWVEF 116

Query: 415 ITASGYLSARKIRSRFQTLVAQACDKCSYRD 507
           ITASGYLSARKIRSR QTLVAQA DKCSYRD
Sbjct: 117 ITASGYLSARKIRSRLQTLVAQAVDKCSYRD 147



 Score = 97.5 bits (232), Expect = 3e-19
 Identities = 44/67 (65%), Positives = 52/67 (77%)
 Frame = +3

Query: 510 VKMIAETTEVKLRIRERYIVQITPAFKCAGLLRGPPHTGPLPAIPWPHPNIIAEVKTESF 689
           VKM+A+T+EVKLRIR+RY+VQITPAFKC G+        PLP IPWP PN +AEVK E F
Sbjct: 149 VKMVADTSEVKLRIRDRYVVQITPAFKCTGIWPRSAAHWPLPHIPWPGPNRVAEVKAEGF 208

Query: 690 DLLSKXC 710
           +LLSK C
Sbjct: 209 NLLSKEC 215



 Score = 76.6 bits (180), Expect = 6e-13
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = +2

Query: 89  LVYQMNKFYNEXXANRKAQITKTIHEVCXXVQDVLKEVELQEPRFISSLTDYNGR 253
           LVY +NK+YNE    RKA I KTI EVC  V DVLKEVE+QEPRFISSL + + R
Sbjct: 8   LVYHLNKYYNEKCQARKAAIAKTIREVCKVVSDVLKEVEVQEPRFISSLNEMDNR 62


>UniRef50_Q60YZ0 Cluster: Putative uncharacterized protein CBG18030;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG18030 - Caenorhabditis
           briggsae
          Length = 319

 Score = 96.7 bits (230), Expect = 5e-19
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = +1

Query: 220 VHILSHRLQRQVDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMS 399
           ++ L+     + DG+ V SP E+E V+YLNQMGV NFVDDG++ GCAVLKLSDGRKRSMS
Sbjct: 53  INTLTETSTGRFDGIVVHSPSEYEAVLYLNQMGVFNFVDDGTIQGCAVLKLSDGRKRSMS 112

Query: 400 LWVEFI 417
           LWVEFI
Sbjct: 113 LWVEFI 118



 Score = 70.5 bits (165), Expect = 4e-11
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = +2

Query: 89  LVYQMNKFYNEXXANRKAQITKTIHEVCXXVQDVLKEVELQEPRFISSLTD 241
           +VYQ+N FYNE    RKA++TK +H +   VQ++LKEVE QEPRFI++LT+
Sbjct: 8   VVYQVNTFYNEKVQQRKARVTKNVHRIAKVVQEILKEVEAQEPRFINTLTE 58


>UniRef50_Q62A39 Cluster: Rhs element Vgr protein; n=15;
           Burkholderia|Rep: Rhs element Vgr protein - Burkholderia
           mallei (Pseudomonas mallei)
          Length = 775

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = -1

Query: 498 RALVTGLSYQRLEARPYLARR*VSRSGDEL-DPEGHGTLPPVAQFQDGAARERAVVHEVQ 322
           R LVTG  Y  L   P+      ++SG     P G G    + +F+D A  E+  +H  +
Sbjct: 476 RPLVTGQVYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAER 535

Query: 321 HSHLIEIDDDLELVGRDHFEAVDLPL 244
           +  +    D    VGR H   V + L
Sbjct: 536 NYDVSVERDATTAVGRKHLTLVGVDL 561


>UniRef50_A6GBJ8 Cluster: Rhs element Vgr family protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Rhs element Vgr family
           protein - Plesiocystis pacifica SIR-1
          Length = 721

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = -1

Query: 498 RALVTGLSYQRLEARPYLARR*VSRSGDELDPEGHGTLPPVAQFQDGAARERAVVHEVQH 319
           R LVTG  Y      P+L  +  ++SG   D    G      +F+D A  E   +H  + 
Sbjct: 452 RPLVTGCVYNSERPTPFLLPQRKTQSGWRTDSSPGGAGFNELRFEDAAGAEEIYLHG-ER 510

Query: 318 SHLIEIDDD-LELVGRD 271
              IEI++D  + VGRD
Sbjct: 511 DWSIEIENDKRQQVGRD 527


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,449,096
Number of Sequences: 1657284
Number of extensions: 12615178
Number of successful extensions: 42999
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42981
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)