Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0511
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.62 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.8  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 589 LNAGVICTMYLSRIRNLTSVVSAIIFTNLYTS 494
           LN+G   T + S I N  S +  IIF NL  S
Sbjct: 253 LNSGYNLTTFGSFIFNANSAIEGIIFFNLAKS 284


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 612 PPHTGPLPAIPWPHPN 659
           P ++GP   I  PHPN
Sbjct: 426 PLYSGPYKIIAKPHPN 441


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 597 GLLRGPPHTGPLPAIPWPHP 656
           GL   PPH    PAI  P P
Sbjct: 235 GLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 597 GLLRGPPHTGPLPAIPWPHP 656
           GL   PPH    PAI  P P
Sbjct: 127 GLSPHPPHLSSHPAIVTPGP 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,338
Number of Sequences: 336
Number of extensions: 3009
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)