Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0511
         (726 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023...    29   2.8  
03_06_0265 + 32744609-32745073                                         29   2.8  
08_01_0662 + 5714108-5714147,5714336-5715669,5716482-5716673,571...    29   3.8  
10_01_0324 + 3566638-3566859,3566959-3567223,3567881-3568161           29   5.0  
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183...    29   5.0  
04_04_0906 - 29297188-29297706                                         28   6.6  

>06_03_0668 +
           23301578-23301791,23302102-23302199,23302233-23302301,
           23302674-23302961,23303045-23303208,23303344-23303599,
           23303706-23303816,23304109-23304195,23305916-23305985,
           23306093-23306149,23306309-23306426,23307314-23307403,
           23307492-23307671,23307816-23307893,23308016-23308088
          Length = 650

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +1

Query: 175 GSARCTQGGGVAGAEVHILSHRLQRQVDGLEVVSPHEFEIVIYLNQMGVLN 327
           GSAR   G G   +EV      L  Q+DG E  + ++ ++++  N+M +L+
Sbjct: 294 GSARMQSGSGGGDSEVQRTMLELLNQLDGFE--ASNKIKVLMATNRMDILD 342


>03_06_0265 + 32744609-32745073
          Length = 154

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +2

Query: 581 GVQVRRPVARSAAHWAPPGDTLAASQYNRRS*----NGKFRFIIQGMS 712
           G +   P A SAA  A  G  +AAS  + RS     NG  RF+IQG S
Sbjct: 12  GGEASPPHAGSAAAMAGAGRDIAASPTSSRSVTQTVNGSHRFVIQGYS 59


>08_01_0662 +
           5714108-5714147,5714336-5715669,5716482-5716673,
           5716769-5716958,5717398-5717477
          Length = 611

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -2

Query: 530 CFRDHFHESLYEHLSQA*ATNVWKRDRILRADRYPEAVMNSTQRD 396
           C   ++H  L+E+LS   A  +   D  LR D +   V   T  D
Sbjct: 295 CITPYYHVPLFENLSSLVAATIMLDDSFLRRDEFLYEVEEETSDD 339


>10_01_0324 + 3566638-3566859,3566959-3567223,3567881-3568161
          Length = 255

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -2

Query: 635 REGPSVRRTAQQAGALERRGYLHYV--SFTNSQLDFGCF 525
           REGPS+RR      A     Y  Y     TN+  D GC+
Sbjct: 212 REGPSLRRCLDDEWAAYAADYAAYTDDDLTNADDDIGCY 250


>07_03_0776 +
           21417476-21417691,21417775-21417855,21417941-21418342,
           21418457-21418621,21418729-21419460,21419542-21419748
          Length = 600

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +3

Query: 195 RRWSCRSRGS--YPLSPTTTAGRRPRSGL 275
           +RW+CRSR +   PL P    GRR R  L
Sbjct: 16  QRWTCRSRAASPAPLLPPPATGRRRRRRL 44


>04_04_0906 - 29297188-29297706
          Length = 172

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 229 LSHRLQRQVDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGC 357
           L+  L+R++  L++++   F     L ++GV++  +D  LPGC
Sbjct: 17  LALTLRRKLLLLDILAVLRFLAAALLERLGVVSCQEDNELPGC 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,306,657
Number of Sequences: 37544
Number of extensions: 364167
Number of successful extensions: 1403
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)