BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0511
(726 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128466-1|AAM75059.1| 365|Drosophila melanogaster RE21580p pro... 169 3e-42
AE014298-831|AAF46112.2| 365|Drosophila melanogaster CG4746-PA ... 169 3e-42
AF214524-1|AAF24503.1| 359|Drosophila melanogaster mab-21 protein. 169 4e-42
AF145667-1|AAD38642.1| 368|Drosophila melanogaster BcDNA.GH1141... 160 2e-39
AE014298-830|AAF46111.1| 368|Drosophila melanogaster CG4766-PA ... 160 2e-39
BT011456-1|AAR99114.1| 276|Drosophila melanogaster RE34459p pro... 30 3.7
AE013599-956|AAF58883.1| 276|Drosophila melanogaster CG1675-PA ... 30 3.7
AY089485-1|AAL90223.2| 150|Drosophila melanogaster AT30660p pro... 29 4.9
AE014297-3852|AAF56508.2| 145|Drosophila melanogaster CG31093-P... 29 4.9
L11328-1|AAA28669.1| 508|Drosophila melanogaster kinesin light ... 29 6.4
L11013-1|AAA02481.1| 508|Drosophila melanogaster kinesin light ... 29 6.4
AY061164-1|AAL28712.1| 508|Drosophila melanogaster LD13018p pro... 29 6.4
AE014296-2176|AAF49890.2| 508|Drosophila melanogaster CG5433-PA... 29 6.4
AF212370-1|AAG43829.1| 402|Drosophila melanogaster spinster typ... 29 8.5
AF212369-1|AAG43828.1| 605|Drosophila melanogaster spinster typ... 29 8.5
AF212368-1|AAG43827.1| 605|Drosophila melanogaster spinster typ... 29 8.5
AF212367-1|AAG43826.1| 630|Drosophila melanogaster spinster typ... 29 8.5
AF212366-1|AAG43825.1| 630|Drosophila melanogaster spinster typ... 29 8.5
AE013599-2193|AAM70953.1| 402|Drosophila melanogaster CG8428-PE... 29 8.5
AE013599-2192|AAM70952.1| 630|Drosophila melanogaster CG8428-PD... 29 8.5
AE013599-2191|AAM70951.1| 630|Drosophila melanogaster CG8428-PB... 29 8.5
AE013599-2190|AAF58060.2| 605|Drosophila melanogaster CG8428-PA... 29 8.5
AE013599-2189|AAM70950.1| 605|Drosophila melanogaster CG8428-PC... 29 8.5
>AY128466-1|AAM75059.1| 365|Drosophila melanogaster RE21580p
protein.
Length = 365
Score = 169 bits (412), Expect = 3e-42
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +1
Query: 256 DGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYL 435
+GLEV+SP EFEI+IYLNQMGVLNFVDDG+LPGCAVLKLSDGRKRSMSLWVEFITASGYL
Sbjct: 70 EGLEVISPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWVEFITASGYL 129
Query: 436 SARKIRSRFQTLVAQACDKCSYRD 507
SARKIRSRFQTLVAQACDKC+YRD
Sbjct: 130 SARKIRSRFQTLVAQACDKCAYRD 153
Score = 113 bits (272), Expect = 2e-25
Identities = 53/70 (75%), Positives = 57/70 (81%)
Frame = +3
Query: 510 VKMIAETTEVKLRIRERYIVQITPAFKCAGLLRGPPHTGPLPAIPWPHPNIIAEVKTESF 689
VKMIA+TTEVKLRIRER IVQITPAFKCAGL PLP IPWPHPNI+AEVKTE F
Sbjct: 155 VKMIADTTEVKLRIRERIIVQITPAFKCAGLWPRSASHWPLPGIPWPHPNIVAEVKTEGF 214
Query: 690 DLLSKXCLXL 719
D+LSK C+ L
Sbjct: 215 DMLSKECIAL 224
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = +2
Query: 89 LVYQMNKFYNEXXANRKAQITKTIHEVCXXVQDVLKEVELQEPRFISSLTDYNGR 253
+VYQMNK+ + RKAQI K I EVC VQDVLKEVE+QEPRFISSL DYNGR
Sbjct: 14 MVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFISSLNDYNGR 68
>AE014298-831|AAF46112.2| 365|Drosophila melanogaster CG4746-PA
protein.
Length = 365
Score = 169 bits (412), Expect = 3e-42
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +1
Query: 256 DGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYL 435
+GLEV+SP EFEI+IYLNQMGVLNFVDDG+LPGCAVLKLSDGRKRSMSLWVEFITASGYL
Sbjct: 70 EGLEVISPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWVEFITASGYL 129
Query: 436 SARKIRSRFQTLVAQACDKCSYRD 507
SARKIRSRFQTLVAQACDKC+YRD
Sbjct: 130 SARKIRSRFQTLVAQACDKCAYRD 153
Score = 113 bits (272), Expect = 2e-25
Identities = 53/70 (75%), Positives = 57/70 (81%)
Frame = +3
Query: 510 VKMIAETTEVKLRIRERYIVQITPAFKCAGLLRGPPHTGPLPAIPWPHPNIIAEVKTESF 689
VKMIA+TTEVKLRIRER IVQITPAFKCAGL PLP IPWPHPNI+AEVKTE F
Sbjct: 155 VKMIADTTEVKLRIRERIIVQITPAFKCAGLWPRSASHWPLPGIPWPHPNIVAEVKTEGF 214
Query: 690 DLLSKXCLXL 719
D+LSK C+ L
Sbjct: 215 DMLSKECIAL 224
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = +2
Query: 89 LVYQMNKFYNEXXANRKAQITKTIHEVCXXVQDVLKEVELQEPRFISSLTDYNGR 253
+VYQMNK+ + RKAQI K I EVC VQDVLKEVE+QEPRFISSL DYNGR
Sbjct: 14 MVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFISSLNDYNGR 68
>AF214524-1|AAF24503.1| 359|Drosophila melanogaster mab-21 protein.
Length = 359
Score = 169 bits (410), Expect = 4e-42
Identities = 78/83 (93%), Positives = 82/83 (98%)
Frame = +1
Query: 259 GLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLS 438
GLEV+SP EFEI+IYLNQMGVLNFVDDG+LPGCAVLKLSDGRKRSMSLWVEFITASGYLS
Sbjct: 65 GLEVISPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWVEFITASGYLS 124
Query: 439 ARKIRSRFQTLVAQACDKCSYRD 507
ARKIRSRFQTLVAQACDKC+YRD
Sbjct: 125 ARKIRSRFQTLVAQACDKCAYRD 147
Score = 111 bits (267), Expect = 9e-25
Identities = 52/70 (74%), Positives = 57/70 (81%)
Frame = +3
Query: 510 VKMIAETTEVKLRIRERYIVQITPAFKCAGLLRGPPHTGPLPAIPWPHPNIIAEVKTESF 689
VKMIA+TTEVKLRIRER IVQITPAFKCAGL PLP IPWPHPNI+AEVKTE F
Sbjct: 149 VKMIADTTEVKLRIRERIIVQITPAFKCAGLWPRSASHWPLPGIPWPHPNIVAEVKTEGF 208
Query: 690 DLLSKXCLXL 719
++LSK C+ L
Sbjct: 209 NMLSKECIAL 218
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = +2
Query: 89 LVYQMNKFYNEXXANRKAQITKTIHEVCXXVQDVLKEVELQEPRFISSLTDYNGR 253
+VYQMNK+ + RKAQI K I EVC VQDVLKEVE+QEPRFISSL DYNGR
Sbjct: 8 MVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFISSLNDYNGR 62
>AF145667-1|AAD38642.1| 368|Drosophila melanogaster BcDNA.GH11415
protein.
Length = 368
Score = 160 bits (388), Expect = 2e-39
Identities = 73/84 (86%), Positives = 81/84 (96%)
Frame = +1
Query: 256 DGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYL 435
+G+EV+SP+EFEIV+YLNQMGV NFVDDG+LPGCAVLKLSDGRKRSMSLWVEFITASGYL
Sbjct: 70 EGVEVISPNEFEIVLYLNQMGVFNFVDDGTLPGCAVLKLSDGRKRSMSLWVEFITASGYL 129
Query: 436 SARKIRSRFQTLVAQACDKCSYRD 507
S+RKIR+RFQTLVAQACDK YRD
Sbjct: 130 SSRKIRARFQTLVAQACDKSVYRD 153
Score = 101 bits (242), Expect = 1e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = +3
Query: 510 VKMIAETTEVKLRIRERYIVQITPAFKCAGLLRGPPHTGPLPAIPWPHPNIIAEVKTESF 689
VKM+ +T+EVKLRIRER++VQITPAFKC+G+ P+P +PWPHPNI+AEVKTE F
Sbjct: 155 VKMVGDTSEVKLRIRERFVVQITPAFKCSGIWPRSAAHWPVPHLPWPHPNIVAEVKTEGF 214
Query: 690 DLLSK 704
DLLSK
Sbjct: 215 DLLSK 219
Score = 68.9 bits (161), Expect = 7e-12
Identities = 32/55 (58%), Positives = 38/55 (69%)
Frame = +2
Query: 89 LVYQMNKFYNEXXANRKAQITKTIHEVCXXVQDVLKEVELQEPRFISSLTDYNGR 253
+VYQMN+F E R + I E+C VQD+LKEVELQEPRFISSL + NGR
Sbjct: 14 MVYQMNRFCTERVQARMYKTATAIREICKIVQDILKEVELQEPRFISSLVECNGR 68
>AE014298-830|AAF46111.1| 368|Drosophila melanogaster CG4766-PA
protein.
Length = 368
Score = 160 bits (388), Expect = 2e-39
Identities = 73/84 (86%), Positives = 81/84 (96%)
Frame = +1
Query: 256 DGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYL 435
+G+EV+SP+EFEIV+YLNQMGV NFVDDG+LPGCAVLKLSDGRKRSMSLWVEFITASGYL
Sbjct: 70 EGVEVISPNEFEIVLYLNQMGVFNFVDDGTLPGCAVLKLSDGRKRSMSLWVEFITASGYL 129
Query: 436 SARKIRSRFQTLVAQACDKCSYRD 507
S+RKIR+RFQTLVAQACDK YRD
Sbjct: 130 SSRKIRARFQTLVAQACDKSVYRD 153
Score = 101 bits (242), Expect = 1e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = +3
Query: 510 VKMIAETTEVKLRIRERYIVQITPAFKCAGLLRGPPHTGPLPAIPWPHPNIIAEVKTESF 689
VKM+ +T+EVKLRIRER++VQITPAFKC+G+ P+P +PWPHPNI+AEVKTE F
Sbjct: 155 VKMVGDTSEVKLRIRERFVVQITPAFKCSGIWPRSAAHWPVPHLPWPHPNIVAEVKTEGF 214
Query: 690 DLLSK 704
DLLSK
Sbjct: 215 DLLSK 219
Score = 68.9 bits (161), Expect = 7e-12
Identities = 32/55 (58%), Positives = 38/55 (69%)
Frame = +2
Query: 89 LVYQMNKFYNEXXANRKAQITKTIHEVCXXVQDVLKEVELQEPRFISSLTDYNGR 253
+VYQMN+F E R + I E+C VQD+LKEVELQEPRFISSL + NGR
Sbjct: 14 MVYQMNRFCTERVQARMYKTATAIREICKIVQDILKEVELQEPRFISSLVECNGR 68
>BT011456-1|AAR99114.1| 276|Drosophila melanogaster RE34459p
protein.
Length = 276
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 455 DRILRADRYPEAVMNST-QRDMERFLPSLSFKTAQPGSEPSSTKFSTP 315
D++ D + V S+ Q+D S KTA P S SSTK + P
Sbjct: 11 DKLQMMDETTDKVQGSSKQKDDSSIAASSDAKTASPSSSDSSTKVAAP 58
>AE013599-956|AAF58883.1| 276|Drosophila melanogaster CG1675-PA
protein.
Length = 276
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 455 DRILRADRYPEAVMNST-QRDMERFLPSLSFKTAQPGSEPSSTKFSTP 315
D++ D + V S+ Q+D S KTA P S SSTK + P
Sbjct: 11 DKLQMMDETTDKVQGSSKQKDDSSIAASSDAKTASPSSSDSSTKVAAP 58
>AY089485-1|AAL90223.2| 150|Drosophila melanogaster AT30660p
protein.
Length = 150
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 604 CAVRRTLGPSRRYPGRIPI*SPKLKRKVSIYYPRXVSRCXG 726
CA+RRT R PG P P+L+ + PR V+ G
Sbjct: 101 CAIRRTANSCSRPPGSEPESKPELESGPEVPKPRTVTLAAG 141
>AE014297-3852|AAF56508.2| 145|Drosophila melanogaster CG31093-PA
protein.
Length = 145
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 604 CAVRRTLGPSRRYPGRIPI*SPKLKRKVSIYYPRXVSRCXG 726
CA+RRT R PG P P+L+ + PR V+ G
Sbjct: 96 CAIRRTANSCSRPPGSEPESKPELESGPEVPKPRTVTLAAG 136
>L11328-1|AAA28669.1| 508|Drosophila melanogaster kinesin light
chain protein.
Length = 508
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = -2
Query: 671 FGDYIGMRPGYRREGPSVRRTAQQAGALERRGYLHYVSFTNSQLDFGCFRDHFHESLYEH 492
+G+Y G + + P+V T + GAL RR + + T ++ + +
Sbjct: 419 YGEYGGWHKAAKVDSPTVTTTLKNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTK 478
Query: 491 LSQA*ATNVWKRDRILRAD 435
LSQ +N +R + ++ D
Sbjct: 479 LSQLLTSNEKRRSKAIKED 497
>L11013-1|AAA02481.1| 508|Drosophila melanogaster kinesin light
chain protein.
Length = 508
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = -2
Query: 671 FGDYIGMRPGYRREGPSVRRTAQQAGALERRGYLHYVSFTNSQLDFGCFRDHFHESLYEH 492
+G+Y G + + P+V T + GAL RR + + T ++ + +
Sbjct: 419 YGEYGGWHKAAKVDSPTVTTTLKNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTK 478
Query: 491 LSQA*ATNVWKRDRILRAD 435
LSQ +N +R + ++ D
Sbjct: 479 LSQLLTSNEKRRSKAIKED 497
>AY061164-1|AAL28712.1| 508|Drosophila melanogaster LD13018p
protein.
Length = 508
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = -2
Query: 671 FGDYIGMRPGYRREGPSVRRTAQQAGALERRGYLHYVSFTNSQLDFGCFRDHFHESLYEH 492
+G+Y G + + P+V T + GAL RR + + T ++ + +
Sbjct: 419 YGEYGGWHKAAKVDSPTVTTTLKNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTK 478
Query: 491 LSQA*ATNVWKRDRILRAD 435
LSQ +N +R + ++ D
Sbjct: 479 LSQLLTSNEKRRSKAIKED 497
>AE014296-2176|AAF49890.2| 508|Drosophila melanogaster CG5433-PA
protein.
Length = 508
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = -2
Query: 671 FGDYIGMRPGYRREGPSVRRTAQQAGALERRGYLHYVSFTNSQLDFGCFRDHFHESLYEH 492
+G+Y G + + P+V T + GAL RR + + T ++ + +
Sbjct: 419 YGEYGGWHKAAKVDSPTVTTTLKNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTK 478
Query: 491 LSQA*ATNVWKRDRILRAD 435
LSQ +N +R + ++ D
Sbjct: 479 LSQLLTSNEKRRSKAIKED 497
>AF212370-1|AAG43829.1| 402|Drosophila melanogaster spinster type V
protein.
Length = 402
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AF212369-1|AAG43828.1| 605|Drosophila melanogaster spinster type
IV protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AF212368-1|AAG43827.1| 605|Drosophila melanogaster spinster type
III protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AF212367-1|AAG43826.1| 630|Drosophila melanogaster spinster type
II protein.
Length = 630
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AF212366-1|AAG43825.1| 630|Drosophila melanogaster spinster type I
protein.
Length = 630
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AE013599-2193|AAM70953.1| 402|Drosophila melanogaster CG8428-PE,
isoform E protein.
Length = 402
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AE013599-2192|AAM70952.1| 630|Drosophila melanogaster CG8428-PD,
isoform D protein.
Length = 630
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AE013599-2191|AAM70951.1| 630|Drosophila melanogaster CG8428-PB,
isoform B protein.
Length = 630
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AE013599-2190|AAF58060.2| 605|Drosophila melanogaster CG8428-PA,
isoform A protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
>AE013599-2189|AAM70950.1| 605|Drosophila melanogaster CG8428-PC,
isoform C protein.
Length = 605
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 393 HVPLGRVHHRFGIPIGAQDTVALPNVGSSGL*QVLV*RFVKMI 521
H PLG HH GIP A L +VG S V V FV +I
Sbjct: 84 HHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLI 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,782,415
Number of Sequences: 53049
Number of extensions: 592270
Number of successful extensions: 2183
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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