Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0499
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    49   5e-08
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    41   1e-05
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 27/87 (31%), Positives = 42/87 (48%)
 Frame = +1

Query: 295 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFH 474
           L R E F        + A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 475 RTDCKGLYLXALTRSIPNFFVDXHVIS 555
           R D + L L +     P+ +VD  V +
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQVFA 160


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 18/59 (30%), Positives = 32/59 (54%)
 Frame = +1

Query: 379 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLXALTRSIPNFFVDXHVIS 555
           ++ D  +  A + R+R+N  +F YA + A  HR D + + L +   S P+ +VD  V +
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFA 160


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 447 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 340
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 671 EXRRLLYXKTVVXVLFHGGTST 736
           + ++  Y  TV   + +GGTST
Sbjct: 254 QGKKFAYNSTVKVAVIYGGTST 275


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 123 DMKMKELCIMKLLDHI 170
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,599
Number of Sequences: 336
Number of extensions: 2486
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)