Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0499
         (783 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376           31   0.78 
10_08_0786 - 20540061-20542106                                         29   5.5  

>10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376
          Length = 746

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +2

Query: 23  GSSTTGLLGRGVTSSD*WWLRDDGLHQGTNG 115
           GS T G +G G T SD WW +D+G   G+NG
Sbjct: 369 GSRTGGTMGSG-TGSDWWWKQDNG--GGSNG 396


>10_08_0786 - 20540061-20542106
          Length = 681

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 253 RVVKQFMEMYKMGMLPRGETFVHTNELQMEEAVKVFRVLYYAK 381
           +V K  +EM KMG +PR E   H     +EE VK  ++ Y+++
Sbjct: 577 KVAKLDLEMRKMGYIPRTEFVYH----DLEEEVKEQQLSYHSE 615


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,281,032
Number of Sequences: 37544
Number of extensions: 312019
Number of successful extensions: 795
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)