Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0499
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL132949-29|CAB61107.1|  209|Caenorhabditis elegans Hypothetical...    29   5.0  
Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 408 RSPHENIEVLSVVEDSEDFD 349
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>AL132949-29|CAB61107.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.33 protein.
          Length = 209

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = -1

Query: 534 EEVRDRSRKSGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSED 355
           E+++D++   GQV  L+V   +   S ++  + + + F +  ++P E     ++V+  +D
Sbjct: 42  EKIKDKT-PFGQVPVLSVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKD 99

Query: 354 FDGFF 340
           F G F
Sbjct: 100 FMGAF 104


>Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical
           protein F37B1.2 protein.
          Length = 209

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = -1

Query: 534 EEVRDRSRKSGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSED 355
           E+++D++   GQ+  L V   E   S ++  + +   F    ++P E   V +VV+  +D
Sbjct: 42  EKLKDKT-PMGQMPVLNVDGFEIPQSAAITRYLA-RKFGFAGKTPEEEAWVDAVVDQFKD 99

Query: 354 FDGFFHLELVGVDEGLS 304
           F G F   ++    G S
Sbjct: 100 FFGEFRKLIIAQRAGKS 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,408,807
Number of Sequences: 27780
Number of extensions: 244078
Number of successful extensions: 526
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)