Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0497
         (453 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8RST4 Cluster: Flagellar hook associated protein 2; n=...    32   5.0  
UniRef50_A7RMH0 Cluster: Predicted protein; n=1; Nematostella ve...    32   5.0  
UniRef50_Q8IB25 Cluster: Putative uncharacterized protein MAL8P1...    32   6.6  
UniRef50_UPI000049978D Cluster: Rho guanine nucleotide exchange ...    31   8.7  

>UniRef50_Q8RST4 Cluster: Flagellar hook associated protein 2; n=1;
           Erwinia chrysanthemi|Rep: Flagellar hook associated
           protein 2 - Erwinia chrysanthemi
          Length = 484

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +1

Query: 163 VASLYAN-GTSVSDSKLXRPHLXQQSSSVDRIRTMTXEKSQTSILTRTKTGDEVXSS--N 333
           ++S+  N GTSVS S L    L  +  +V+  R       QTS+  +      V S+  N
Sbjct: 12  ISSIGMNLGTSVSGSSLDLSSLISKLQTVEEQRLTPYNNKQTSLSKQATAYTTVESAMKN 71

Query: 334 VRKXTSAXENNKNXTGMEVT 393
           ++  T+  +N K  T   VT
Sbjct: 72  LQSATTTLQNMKTITSTAVT 91


>UniRef50_A7RMH0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1233

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 265 TXEKSQTSILTRTKTGDEVXSSNVRKXTSAXENNKNXTGMEVTGLSQXSG 414
           T ++S +++LT+TKT D+V     +K TS   NN   +      +    G
Sbjct: 183 TKKRSMSNVLTKTKTTDDVGPVRKKKKTSKYLNNNTGSTTSTNSVKTTQG 232


>UniRef50_Q8IB25 Cluster: Putative uncharacterized protein
           MAL8P1.64; n=3; Plasmodium|Rep: Putative uncharacterized
           protein MAL8P1.64 - Plasmodium falciparum (isolate 3D7)
          Length = 1313

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +1

Query: 235 SSSVDRIRTMTXEKSQTSIL-TRTKTGDEVXSSNVRKXTSAXENNK 369
           + SV RI +   +K +  IL T+ +TG E  SSN+ K  S  E NK
Sbjct: 407 NESVKRILSTFLKKEENVILFTKEQTGQENMSSNLWKHVSCNEQNK 452


>UniRef50_UPI000049978D Cluster: Rho guanine nucleotide exchange
           factor; n=1; Entamoeba histolytica HM-1:IMSS|Rep: Rho
           guanine nucleotide exchange factor - Entamoeba
           histolytica HM-1:IMSS
          Length = 876

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 17/80 (21%), Positives = 36/80 (45%)
 Frame = +1

Query: 196 SDSKLXRPHLXQQSSSVDRIRTMTXEKSQTSILTRTKTGDEVXSSNVRKXTSAXENNKNX 375
           ++ KL    L +Q+SS  +   ++    Q   LT + + D+    +V+       NN+  
Sbjct: 508 NNKKLGESTLTEQNSSESKDTLLSTSTEQDQQLTTSSSNDDNKKIDVQPILQEESNNEQS 567

Query: 376 TGMEVTGLSQXSGMQGLPRI 435
           T ++V  ++       LP++
Sbjct: 568 TSVDVENMNNNEQPLELPKL 587


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.317    0.127    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,805,885
Number of Sequences: 1657284
Number of extensions: 5668480
Number of successful extensions: 10552
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10547
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)