Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0497
         (453 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42204-1|AAB50956.1|  855|Drosophila melanogaster putative potas...    29   3.9  
U36925-1|AAB50936.1|  855|Drosophila melanogaster seizure potass...    29   3.9  
AY058350-1|AAL13579.1|  855|Drosophila melanogaster GH12235p pro...    29   3.9  
AE013599-3790|AAF47148.1|  855|Drosophila melanogaster CG3182-PB...    29   3.9  
AE013599-3789|AAM68296.1|  855|Drosophila melanogaster CG3182-PA...    29   3.9  
AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p pro...    27   8.9  
AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA...    27   8.9  
AE014296-3109|AAF49186.2|  246|Drosophila melanogaster CG14082-P...    27   8.9  

>U42204-1|AAB50956.1|  855|Drosophila melanogaster putative
           potassium channel subunithomolog protein.
          Length = 855

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 70  YISSTYWGYGVFAPNPXAQKMRTVQVIL--CLFVASLYANGTSV 195
           + S T  G+G  APN  A+K  T+ V+L   L  AS++ N +++
Sbjct: 534 FTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAI 577


>U36925-1|AAB50936.1|  855|Drosophila melanogaster seizure potassium
           channel protein.
          Length = 855

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 70  YISSTYWGYGVFAPNPXAQKMRTVQVIL--CLFVASLYANGTSV 195
           + S T  G+G  APN  A+K  T+ V+L   L  AS++ N +++
Sbjct: 534 FTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAI 577


>AY058350-1|AAL13579.1|  855|Drosophila melanogaster GH12235p
           protein.
          Length = 855

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 70  YISSTYWGYGVFAPNPXAQKMRTVQVIL--CLFVASLYANGTSV 195
           + S T  G+G  APN  A+K  T+ V+L   L  AS++ N +++
Sbjct: 534 FTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAI 577


>AE013599-3790|AAF47148.1|  855|Drosophila melanogaster CG3182-PB,
           isoform B protein.
          Length = 855

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 70  YISSTYWGYGVFAPNPXAQKMRTVQVIL--CLFVASLYANGTSV 195
           + S T  G+G  APN  A+K  T+ V+L   L  AS++ N +++
Sbjct: 534 FTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAI 577


>AE013599-3789|AAM68296.1|  855|Drosophila melanogaster CG3182-PA,
           isoform A protein.
          Length = 855

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 70  YISSTYWGYGVFAPNPXAQKMRTVQVIL--CLFVASLYANGTSV 195
           + S T  G+G  APN  A+K  T+ V+L   L  AS++ N +++
Sbjct: 534 FTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAI 577


>AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p
           protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 127 KMRTVQVILCLFVASLYANGTSVSDSKL-XRPHL 225
           +M+T+ V LC F  SL   G S+S  KL   P+L
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPYL 366


>AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA
           protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 127 KMRTVQVILCLFVASLYANGTSVSDSKL-XRPHL 225
           +M+T+ V LC F  SL   G S+S  KL   P+L
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPYL 366


>AE014296-3109|AAF49186.2|  246|Drosophila melanogaster CG14082-PA
           protein.
          Length = 246

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/74 (24%), Positives = 34/74 (45%)
 Frame = +1

Query: 229 QQSSSVDRIRTMTXEKSQTSILTRTKTGDEVXSSNVRKXTSAXENNKNXTGMEVTGLSQX 408
           + +++++R +T      QTSI    +  D   ++N+R  +++     + T +    L   
Sbjct: 34  KHAAALERAQT---SPDQTSIEDANEFHDNGLATNLRLCSASSSTTSSLTSVAAVSLGGA 90

Query: 409 SGMQGLPRISSGSA 450
            G  G    SSGSA
Sbjct: 91  GGAGGANTTSSGSA 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.127    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,919,557
Number of Sequences: 53049
Number of extensions: 288650
Number of successful extensions: 454
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)