Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0494
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    25   0.59 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   3.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   3.1  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   3.1  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   3.1  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 247 QEFDDIKHTTLSERGALREAARCLKCADAPCQKSCPT 357
           Q F+DI+H  +      R+  + L  A A  +KS PT
Sbjct: 89  QSFEDIQHQRVMANVRERQRTQSLNEAFASLRKSIPT 125


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 551 EMLKXSNIDSXFFSA*RLHPPTHKSLVGQTMPQV--KPRG 438
           E+L+  +++  + +A ++H P   SLV    P +  KP G
Sbjct: 251 EVLQKMSVEEMYLAAEKVHDPFIASLVRPHGPVIEKKPEG 290


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 551 EMLKXSNIDSXFFSA*RLHPPTHKSLVGQTMPQV--KPRG 438
           E+L+  +++  + +A ++H P   SLV    P +  KP G
Sbjct: 251 EVLQKMSVEEMYLAAEKVHDPFIASLVRPHGPVIEKKPEG 290


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 551 EMLKXSNIDSXFFSA*RLHPPTHKSLVGQTMPQV--KPRG 438
           E+L+  +++  + +A ++H P   SLV    P +  KP G
Sbjct: 251 EVLQKMSVEEMYLAAEKVHDPFIASLVRPHGPVIEKKPEG 290


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 551 EMLKXSNIDSXFFSA*RLHPPTHKSLVGQTMPQV--KPRG 438
           E+L+  +++  + +A ++H P   SLV    P +  KP G
Sbjct: 250 EVLQKMSVEEMYLAAEKVHDPFIASLVRPHGPVIEKKPEG 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,447
Number of Sequences: 336
Number of extensions: 3499
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)