Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0493
(569 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 160 2e-38
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 158 1e-37
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 150 2e-35
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 121 1e-26
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 117 2e-25
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 116 4e-25
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 108 1e-22
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 93 3e-18
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 93 4e-18
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 1e-17
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 86 5e-16
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 85 1e-15
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 81 2e-14
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 80 3e-14
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 78 1e-13
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 77 4e-13
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 75 9e-13
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 75 1e-12
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 70 3e-11
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 70 3e-11
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 67 3e-10
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 64 2e-09
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 62 1e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 61 2e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 3e-08
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 60 4e-08
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 60 5e-08
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 58 1e-07
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 57 3e-07
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 1e-06
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 55 1e-06
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 51 2e-05
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 50 4e-05
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 50 5e-05
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 1e-04
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 1e-04
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 46 5e-04
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 44 0.003
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 42 0.013
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 39 0.072
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 39 0.072
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 39 0.095
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 38 0.17
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 38 0.22
UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3; ... 36 0.67
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 36 0.67
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 36 0.88
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 34 2.0
UniRef50_Q68VE1 Cluster: Pilus assembling protein; n=3; Bdellovi... 34 2.0
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 3.6
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 33 3.6
UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;... 33 4.7
UniRef50_Q6D9T2 Cluster: Putative Type IV pilus protein; n=1; Pe... 33 4.7
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 33 4.7
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 33 4.7
UniRef50_Q62ER3 Cluster: Glycosyl transferase, group 2 family pr... 33 6.2
UniRef50_UPI0000F1FF14 Cluster: PREDICTED: similar to mKIAA0909 ... 32 8.2
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 32 8.2
UniRef50_Q6ZTH5 Cluster: CDNA FLJ44650 fis, clone BRACE2039607; ... 32 8.2
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 160 bits (388), Expect = 2e-38
Identities = 77/112 (68%), Positives = 88/112 (78%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +AI+ HL+NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGA 115
Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
IAP V +PA NTGLGPEKTSF QAL I TKI +GTIEI+ V ++KPGDKV
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKV 167
Score = 109 bits (261), Expect = 6e-23
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTM 246
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVG +Q+ I +SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 247 MRK 255
MRK
Sbjct: 61 MRK 63
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 158 bits (383), Expect = 1e-37
Identities = 76/112 (67%), Positives = 87/112 (77%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +AI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
IAP V +PA NTGLGPEKTSF QAL I TKI +GTIEI+ V ++K GDKV
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKV 167
Score = 112 bits (270), Expect = 5e-24
Identities = 50/63 (79%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTM 246
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVG +Q+ QI +SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 247 MRK 255
MRK
Sbjct: 61 MRK 63
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 150 bits (364), Expect = 2e-35
Identities = 68/112 (60%), Positives = 89/112 (79%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +A++ HL+ NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GA
Sbjct: 56 GKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGA 115
Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
IAP+ V +PA NTGLGPEKTSF QALSI TKI +GTIEI+ VH++K G+KV
Sbjct: 116 IAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKV 167
Score = 86.6 bits (205), Expect = 4e-16
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTM 246
MGREDKA WKSNY ++++ L DEY + +V DNVG +Q+ QI ISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 247 MRK 255
+RK
Sbjct: 61 IRK 63
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 121 bits (292), Expect = 1e-26
Identities = 58/112 (51%), Positives = 79/112 (70%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +AIK+ + P LE+LLPHIKGNVGF+FT+GDL +++ KL E K +PA+ G
Sbjct: 63 GKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGV 122
Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
IAP V++PA +TGL P +T+F QAL+I +KI KG IEI ++K G+KV
Sbjct: 123 IAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKV 174
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTM 246
+ +E K K Y VK+ +LL+EY + +V DNVG Q I LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 247 MRKPSKTTWTTIQP 288
+RK K T QP
Sbjct: 68 IRKAIKNQAET-QP 80
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 117 bits (282), Expect = 2e-25
Identities = 58/114 (50%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK ++++ H +N N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR
Sbjct: 56 GKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 115
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
G +AP+ VV+ NTGL P +TSF Q L+IPTKI KGT+EII V ++K GDKV
Sbjct: 116 GLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKV 169
Score = 66.1 bits (154), Expect = 5e-10
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTM 246
M + KA K Y K+ QL+DEY + +V ADNVG Q+ I LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 247 MRK 255
M++
Sbjct: 61 MKR 63
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 116 bits (279), Expect = 4e-25
Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 2/114 (1%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK ++++ H D N A LLP ++GNVG +FT+GDL EV +++ + KV APAR
Sbjct: 57 GKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 116
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
G +AP+ VV+ NTGL P +TSF Q L+IPTKI KGT+EII V ++K GDKV
Sbjct: 117 GLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKV 170
Score = 62.9 bits (146), Expect = 5e-09
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +1
Query: 82 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMRK 255
KA K Y K+ QLL+EY + +V ADNVG Q+ I LRG S+VLMGKNTMM++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKR 64
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 108 bits (259), Expect = 1e-22
Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA-PARPG 407
GK A+K +L P +EKLLP +K N+GFVF + DL E+R+ +L+NK + PAR G
Sbjct: 56 GKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLG 115
Query: 408 AIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
IAP+ V IP TG+ P TSF ++L I TKI+KG IEI VH++K G+KV
Sbjct: 116 VIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKV 168
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTM 246
M + K K Y K+ L+ +Y K IV DNVG Q+ + SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 247 MRKPSK 264
+R K
Sbjct: 61 IRTALK 66
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 93.5 bits (222), Expect = 3e-18
Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Frame = +3
Query: 213 LQYRAHGKKHNDAQAIK-DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQ 389
LQ + ++ D +A D L N +EK L + GN +FT ++ + L +++VQ
Sbjct: 58 LQKKIVERRAEDKKASAYDKLLYNTCIEKKL--LCGNTALIFTNEEIPVITAVLDKHRVQ 115
Query: 390 APARPGAIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
APAR GAIAP V++PA NTG+ P+ TSF QAL+I TKI KGT+EI+ +L GD+V
Sbjct: 116 APARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRV 174
Score = 33.1 bits (72), Expect = 4.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 94 KSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMRK 255
K Y + L +Y + DNV QQ+ + LRG ++MGK T+ +K
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKK 61
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 93.1 bits (221), Expect = 4e-18
Identities = 47/112 (41%), Positives = 68/112 (60%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GKK + I+D D+ P L+ L ++K N +F + ++ EV+ + +V APA+ G
Sbjct: 55 GKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGV 114
Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
AP V+IPA TG+ P +TSF Q L I TKI +G I+I+ VHI+K G KV
Sbjct: 115 FAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKV 166
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +1
Query: 94 KSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMRK 255
K + K +L Y K + AD VG Q+ +I S+RG VLMGK TM+RK
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRK 62
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect(2) = 1e-17
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 252 QAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 386
QAI+ HL+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 693 QAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 41.9 bits (94), Expect(2) = 1e-17
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +3
Query: 483 ALSIPTKILKGTIEIIXGVHILKPGDKV 566
ALSIP KI KGTIEII V ILK GDK+
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI 765
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 86.2 bits (204), Expect = 5e-16
Identities = 43/93 (46%), Positives = 57/93 (61%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 467
L+ L + G VGF+FT + +++ + ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPAS 152
Query: 468 TSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
F AL IPTKI KG I+I +LK G KV
Sbjct: 153 IQFFHALQIPTKIEKGQIQITKDFVVLKTGQKV 185
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQI-XISLRGSSIVLMGKNT 243
MG+++ K F KI +LL +Y + IVG NVG +Q+ I I + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 244 MMRK 255
+ +K
Sbjct: 61 LFKK 64
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 84.6 bits (200), Expect = 1e-15
Identities = 42/95 (44%), Positives = 61/95 (64%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 461
P +E L+ +KGN+G +FT DL +++D + + +APAR G++A V I A TGL P
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
Query: 462 EKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
++T+F Q L+IPTKI K IEI I+ G+KV
Sbjct: 151 KQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKV 185
Score = 45.6 bits (103), Expect = 8e-04
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLR-GSSIVLMGKNT 243
M +DK K+ +F ++ + D+Y + +V DN+ +QI LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 244 MMR 252
+++
Sbjct: 61 LIK 63
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/110 (41%), Positives = 65/110 (59%)
Frame = +3
Query: 237 KHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 416
K+ + + + LD++ L+ LLP+IK NV FVFT GD + + K +A A+ G +A
Sbjct: 60 KNTIIKRVINQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVA 118
Query: 417 PLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
P VVI T GP++ F AL I TKI KG IEI+ V+++K GD V
Sbjct: 119 PADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIV 168
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 82 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMRK 255
K + Y K+ + L EY K +V DNV QI QI LRG + +L GKNT++++
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKR 66
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 80.2 bits (189), Expect = 3e-14
Identities = 43/107 (40%), Positives = 63/107 (58%)
Frame = +3
Query: 246 DAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 425
D + K+ P LE L+P ++GNV +F ++ EV + E+KV A A+ G IAP
Sbjct: 71 DFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPND 130
Query: 426 VVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
V + TG+ P +TSF QAL I TKI+KG I+I+ +H++ KV
Sbjct: 131 VHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKV 177
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +1
Query: 94 KSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMR 252
K +Y+ K+ L++E P+ I A+NVG +Q+ + LR + +L GKNT++R
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIR 55
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 78.2 bits (184), Expect = 1e-13
Identities = 44/97 (45%), Positives = 53/97 (54%)
Frame = -2
Query: 520 IVPFKILVGIERAXKKEVFSGPRPVLXAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 341
+VP ILVG +A KKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 340 RVNTKPTLPLMCGNSFSRAGLLSRWSLMACASLCFFP 230
V TKPTLPL GN+FS++G + LMA ++ F P
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLP 97
Score = 32.7 bits (71), Expect = 6.2
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -1
Query: 254 LRIIVFFPMSTILEPRSEIXICXICXXPTLSAPTMKHFGYSSKSWMILTK 105
L +VF P+ T P + IC TLS PT YSSK + L K
Sbjct: 90 LLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAK 139
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 76.6 bits (180), Expect = 4e-13
Identities = 38/95 (40%), Positives = 53/95 (55%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 461
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP TG+ P
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDP 150
Query: 462 EKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
+ +F ALSI TKI KG IEI V + G K+
Sbjct: 151 SQINFFHALSISTKIQKGQIEITKEVQVCTKGKKI 185
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +1
Query: 79 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMRK 255
DK K + + +LL +Y + +NVG Q+ QI SL ++I+++GKNT++RK
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRK 65
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 75.4 bits (177), Expect = 9e-13
Identities = 39/112 (34%), Positives = 60/112 (53%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK + ++D L N+ ++L I GNV F+FT D +++ L N + A+ G
Sbjct: 55 GKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQ 114
Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
+A V + T + P+ Q+L+IPTKILKG IEII +L+ G K+
Sbjct: 115 VAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKI 166
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 74.9 bits (176), Expect = 1e-12
Identities = 44/112 (39%), Positives = 64/112 (57%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +AI D P L + +KG+V FVF +G+ +++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
+A V + + TG+ P+KTS+ QAL I TKI KG +EII +L GDKV
Sbjct: 138 VAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKV 189
Score = 32.3 bits (70), Expect = 8.2
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTM 246
M R+D K + + +L + Y + +V +NV Q+ I G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 247 MRK 255
+R+
Sbjct: 85 IRR 87
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 70.1 bits (164), Expect = 3e-11
Identities = 38/95 (40%), Positives = 48/95 (50%)
Frame = -1
Query: 560 VTGLQDVYTXDDFNSTL*NLGRDRKSLXERGLLWTEAGVVXGNDD*QWGNGTRTSWSLDF 381
+T + D+ D+FN T NLG + +SL ER L W GV N D WGN T + WS +
Sbjct: 162 LTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNL 221
Query: 380 VLQQFVTDLNEVSAGEHEANVALDVWQQFLEGWIV 276
V D+ + GE E NV LD QQ W V
Sbjct: 222 VGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEV 256
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 70.1 bits (164), Expect = 3e-11
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +3
Query: 255 AIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 434
A+++ LD P LE LL +I+G V F+FT D ++ L E+K APA+PG IAP +V+
Sbjct: 76 ALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVV 135
Query: 435 PAHNTGLGPEK-TSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
P T P S Q +P +I G + I ++K G+++
Sbjct: 136 PEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEI 180
Score = 37.5 bits (83), Expect = 0.22
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLR-GSSIVLMGKNT 243
G E K A WK ++ +L+DEY +V + + Q+ +I LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 244 MMR 252
+MR
Sbjct: 72 LMR 74
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 66.9 bits (156), Expect = 3e-10
Identities = 35/112 (31%), Positives = 55/112 (49%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +A+ + P + +L H+ G +FT G+ ++D + N + + A+ GA
Sbjct: 58 GKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGA 117
Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
IAP V++ T + P AL+I KI KGTIEI ++ G KV
Sbjct: 118 IAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKV 169
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 64.1 bits (149), Expect = 2e-09
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 461
P LEKL+ +I G + T + ++ L +N+ APA+PGA+ P VV+PA T L P
Sbjct: 74 PELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAP 133
Query: 462 EK-TSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
QAL IP +I KG + I +LK G+ +
Sbjct: 134 GPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVI 169
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 455
P ++K++ + G F+FT + L +NK AR G IA + V +PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
Query: 456 GPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
GP T F +A IPTKI +GTI I+ +K G+ +
Sbjct: 119 GPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPI 154
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +3
Query: 279 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 455
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +3
Query: 210 WLQYRAHGKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQ 389
WL R + + A K NP L+P + GNVG + T+GDL EV ++ + KV
Sbjct: 592 WLPKRLFSQHSSRLHAEKT---GNPVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVG 648
Query: 390 APARPGAIAPLSVVIPAHNTGL 455
APAR G ++ + V++P NTGL
Sbjct: 649 APARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 279 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 455
NP L+P + GNVG +FT+GDL E +++ + KV APA G +A + V++P NTGL
Sbjct: 56 NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 279 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 458
N +EK ++ G GF+FT + ++ +++N V+ A+PG + +++PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGIN 142
Query: 459 PEKT-SFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
P S L IPT+I G I + + KPGD V
Sbjct: 143 PGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTV 179
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 59.7 bits (138), Expect = 5e-08
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 455
P ++ ++ KG V +FT ++ L +NK+ AR G IA + VV+PA NTG+
Sbjct: 73 PGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAP 132
Query: 456 GPEKTSFXQALSIPTKILKGTIEI 527
GP T F +A IPTKI +GTI I
Sbjct: 133 GPMLTEFKEA-GIPTKIDQGTIWI 155
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GP 461
+E + H++G +FT + E+ L + K+ AR G IA +V+PA NTG+ GP
Sbjct: 80 VEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGP 139
Query: 462 EKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
++F + L IPT++ +G+I I + KPGD +
Sbjct: 140 MISNFNK-LGIPTRVQEGSIWIAKDTVVAKPGDVI 173
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 56.8 bits (131), Expect = 3e-07
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Frame = +3
Query: 258 IKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVV 431
IK L+N+ +E L +++G VFT+ + ++ L ++K +APA+ G+IAP +V
Sbjct: 59 IKIALENSDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIV 118
Query: 432 IPAHNTGLGPEK-TSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
+PA +T P Q + IP KI KG+I + I+ G+++
Sbjct: 119 VPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEI 164
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +3
Query: 309 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA--HNTGLGPEKTSFXQ 482
++G VGF FT + EV + EN V+ A+PG AP +V+PA N GP + F +
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGK 149
Query: 483 ALSIPTKILKGTIEIIXGVHILKPGDKV 566
L IPT++ +G I I + K G ++
Sbjct: 150 -LKIPTRVQEGKIWIAKDTVVAKAGQEI 176
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 315 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFXQAL 488
G+ F+FT + ++ K+ + + APA+PG +A +V+PA +TGL GP ++F + L
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGK-L 151
Query: 489 SIPTKILKGTIEIIXGVHILKPGDKV 566
I T + GTI I + KPGD +
Sbjct: 152 KIKTMVKGGTIHIAKDTVVAKPGDVI 177
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +3
Query: 306 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFXQA 485
++ N+G +FT +L + + + + + G IA +++I L P +T F QA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 486 LSIPTKILKGTIEIIXGV 539
L IPT+I K +IEII +
Sbjct: 136 LGIPTRISKSSIEIIEDI 153
Score = 35.9 bits (79), Expect = 0.67
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 112 KIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMM 249
K I LL+ Y IV +N+ +QI I LRG+S +++GK + +
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFL 56
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 50.0 bits (114), Expect = 4e-05
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--G 458
+EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA +TG+ G
Sbjct: 79 IEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 459 PEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
P + F + L + TK+ G + ++ + KPGD +
Sbjct: 138 PILSVFGK-LKVQTKVQDGKVHVVKDTVVAKPGDVI 172
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 49.6 bits (113), Expect = 5e-05
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +3
Query: 336 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFXQALSIPTKIL 509
T ++ ++ +E+KV P + G IAP +VIP N +GP +T +AL + TK+
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKVT 144
Query: 510 KGTIEIIXGVHILKPGDKV 566
G IEI+ ++K G+ V
Sbjct: 145 SGKIEIVEDAVVVKEGEIV 163
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 48.4 bits (110), Expect = 1e-04
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +3
Query: 279 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 458
NP KL+ ++ V T + ++ L E+K AP + GAIAP + + + +TG+
Sbjct: 78 NPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMP 137
Query: 459 PEK-TSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
P S +A+ IP I KG I I + K GD +
Sbjct: 138 PGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVI 174
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 467
L+ L +++G VG V T + + +L +K AP G +AP +V+P +TG+ P
Sbjct: 78 LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGP 137
Query: 468 -TSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
Q + +I +G+I+++ + + G+ V
Sbjct: 138 FVGELQTIGANARIQEGSIQVLDDSVVTEEGETV 171
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 46.4 bits (105), Expect = 5e-04
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 330 VFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFXQALSIPTKI 506
+FT + E+ L + K + +PG IA +VIP NTGL P S L IPT+I
Sbjct: 92 LFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRI 151
Query: 507 LKGTIEIIXGVHILKPGDKV 566
+I I + KPGD +
Sbjct: 152 QGNSIVITRDTVVAKPGDTI 171
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 43.6 bits (98), Expect = 0.003
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = -2
Query: 478 KKEVFSGPR--PVLXAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 305
++ +F R PVL G T A P RAGA TL+ + S TS +SP V PTLP
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 304 GNSFSRAG--LLSRWSLM 257
G + G + S SLM
Sbjct: 66 GTRLRKTGFPVFSARSLM 83
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 41.5 bits (93), Expect = 0.013
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 270 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 449
L ++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 450 GLGP-EKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
P Q+ IP I G + I V + K GD +
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVI 170
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 39.1 bits (87), Expect = 0.072
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +3
Query: 264 DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAH 443
D L ++L ++ G + V+T + ++ L K + A+ G IAP +VIP
Sbjct: 73 DSLPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKG 132
Query: 444 NTGL--GPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
T GP F Q + IP I G + I ++K G+K+
Sbjct: 133 PTSFKPGPLVGEF-QQVGIPAGIEGGKVVIKDTKTVVKQGEKI 174
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 39.1 bits (87), Expect = 0.072
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 306 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFXQ 482
H +G +FT + ++ L + K + A+PG AP +VIP T P Q
Sbjct: 80 HAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQ 139
Query: 483 ALSIPTKILKGTIEIIXGVHILKPGDKV 566
+ IP I G ++I ++K G+ +
Sbjct: 140 QVGIPAAIEGGKVKIRETKTVVKKGEVI 167
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 38.7 bits (86), Expect = 0.095
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +3
Query: 207 TWLQYRAHGKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 386
T L RA G DAQA L+KL ++ G+VG +FT D E++D +
Sbjct: 70 TKLTARALGTTPEDAQA--------DGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQ 121
Query: 387 QAPARPGAIAPLSVVIPA 440
AR G++A ++ IP+
Sbjct: 122 VDFARAGSVATRTITIPS 139
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 37.9 bits (84), Expect = 0.17
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 261 KDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 437
K H D+ P L L ++KG +FT+ E+R++L + RPGA A +V I
Sbjct: 73 KTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIA 132
Query: 438 AHNTGLGPEKTS-FXQALSIPTKILKGTIEI 527
+ P + L +P K+++G + +
Sbjct: 133 SGPLPKFPHTMEPVLRQLGMPVKLVRGVVHL 163
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 37.5 bits (83), Expect = 0.22
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 464
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T L P
Sbjct: 72 MNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGP 131
Query: 465 KTSFXQALSIPTKILKGTIEI 527
Q L IP+ I G + +
Sbjct: 132 VVGELQNLGIPSGIDGGKVVV 152
>UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 1522
Score = 35.9 bits (79), Expect = 0.67
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +1
Query: 139 PKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMRKPSKTTWTTIQPSRNCCHTSRA 318
P A + Q + RG S+ +MGK +MR+ S T T+ PS TSR
Sbjct: 315 PSTDSTAAPGTSSSSVAQASLKSRGRSLSVMGKKKVMRRASTGTATSRPPS---AATSRR 371
Query: 319 TLASCSPA 342
SCS A
Sbjct: 372 PSVSCSAA 379
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 35.9 bits (79), Expect = 0.67
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPE 464
L K +KG G +FT EV + E + AR G +A +VV+P +
Sbjct: 90 LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFS 149
Query: 465 KTSFXQALSIPTKILKGTIEIIXGVHILKPGD 560
+ L +PTK+ KG I + + K G+
Sbjct: 150 MEPQLRKLGLPTKLDKGVITLYQQFEVCKEGE 181
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 35.5 bits (78), Expect = 0.88
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +1
Query: 22 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXI 201
L+ + RS L+++ ++ + K +I + D Y +++ + N+ Q+
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 202 SLRGSSIVLMGKNTMMR 252
S++G + + MGKN +MR
Sbjct: 69 SMKGYARIFMGKNQLMR 85
Score = 32.3 bits (70), Expect = 8.2
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +3
Query: 309 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSF---- 476
+KG G +FT +VR L AR G +A ++VIP L +K SF
Sbjct: 107 LKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--QGPLDRDKYSFALEP 164
Query: 477 -XQALSIPTKILKGTIEIIXGVHILKPGD 560
+ L +PT + I ++ + K GD
Sbjct: 165 ELRKLGLPTSLQNTVIHVLCDHVLCKEGD 193
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 34.3 bits (75), Expect = 2.0
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 467
L ++ H++G VG +FT EV + K AR G A +V + P
Sbjct: 96 LHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGPLEQFPHS 155
Query: 468 TS-FXQALSIPTKILKGTIEIIXGVHILKPGD 560
+ L +PT + KG + ++ + K GD
Sbjct: 156 MEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 187
>UniRef50_Q68VE1 Cluster: Pilus assembling protein; n=3;
Bdellovibrio bacteriovorus|Rep: Pilus assembling protein
- Bdellovibrio bacteriovorus
Length = 314
Score = 34.3 bits (75), Expect = 2.0
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 333 FTRGDLVEVRDKLLENKVQAPARPGA-IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKIL 509
F + D + + D+++ N P R G + +++ P +TG+ + +A++IP +
Sbjct: 84 FIQPDAITIPDEIIGNVAAVPIRKGQMVVKNNLLTPGPDTGISLQVAPSKRAVTIPVDEV 143
Query: 510 KGTIEIIXGVHILKPGDKV 566
+G ++I +PGD++
Sbjct: 144 RGVAKLI------RPGDRI 156
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.5 bits (73), Expect = 3.6
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 267 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 362
+L NN L+KLLP I+G ++ RGDL E++
Sbjct: 831 NLANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 33.5 bits (73), Expect = 3.6
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +3
Query: 270 LDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV---- 428
L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 396 LGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARLIS 455
Query: 429 VIPAHN--TGLGPEKTSFXQALSI 494
I HN G PEK S +L +
Sbjct: 456 FIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 170
Score = 33.1 bits (72), Expect = 4.7
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 265 TTWTTIQPSRNCCHTSRATLASCSP---AETSLRSVTNCWRTKS 387
T WTT + T+ AT A+ + A ++ ++TN WRTKS
Sbjct: 107 TRWTTTAATTTTTATTAATTAAAATSTSASNAISTITNAWRTKS 150
>UniRef50_Q6D9T2 Cluster: Putative Type IV pilus protein; n=1;
Pectobacterium atrosepticum|Rep: Putative Type IV pilus
protein - Erwinia carotovora subsp. atroseptica
(Pectobacterium atrosepticum)
Length = 438
Score = 33.1 bits (72), Expect = 4.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 384 VQAPARPGAIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKP 554
+ APA +AP + ++PA P+K + LS P+K + T+ + ++ P
Sbjct: 278 IPAPAAKSTLAPTTALLPAP-VAQSPKKEETTKLLSTPSKTIPATVSPVVSTPVVSP 333
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 33.1 bits (72), Expect = 4.7
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 285 ALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPE 464
++ ++ ++ +FT ++ L + K +P + GAIAP +++ T P
Sbjct: 76 SIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPG 135
Query: 465 K-TSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
Q+ IP I G + + + K G+ V
Sbjct: 136 PILGELQSAGIPASIDAGKVAVKETKVVCKAGEAV 170
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 33.1 bits (72), Expect = 4.7
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 261 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP-ARPGAIAPLSVVIP 437
++H +N L KLL G VG +FT EV E+ VQ AR GA+AP + VIP
Sbjct: 83 EEHAENVSKLTKLL---HGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVIP 138
Query: 438 A 440
A
Sbjct: 139 A 139
>UniRef50_Q62ER3 Cluster: Glycosyl transferase, group 2 family
protein; n=22; Burkholderia|Rep: Glycosyl transferase,
group 2 family protein - Burkholderia mallei
(Pseudomonas mallei)
Length = 417
Score = 32.7 bits (71), Expect = 6.2
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 387 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVH 542
+AP P A P+++V P H G E+T F S + G I+ + GVH
Sbjct: 66 RAPREPHACPPVTIVKPLH----GVERTLFANLASFCEQRYDGPIQFLFGVH 113
>UniRef50_UPI0000F1FF14 Cluster: PREDICTED: similar to mKIAA0909
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
mKIAA0909 protein - Danio rerio
Length = 930
Score = 32.3 bits (70), Expect = 8.2
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -2
Query: 430 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGL 278
T ++G G + S S S +S+ P+ PT+ L GN F R GL
Sbjct: 197 TPEDGGRVEETVGVASPCSASSSSSSSSPPQTQRAPTISLSNGNGFQRGGL 247
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 32.3 bits (70), Expect = 8.2
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 121 QLLDEYPKCFIVGADNVGXQQIXQIXISLRGS--SIVLMGKNTMM 249
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVL 210
>UniRef50_Q6ZTH5 Cluster: CDNA FLJ44650 fis, clone BRACE2039607;
n=1; Homo sapiens|Rep: CDNA FLJ44650 fis, clone
BRACE2039607 - Homo sapiens (Human)
Length = 182
Score = 32.3 bits (70), Expect = 8.2
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 244 MMRKPSKTTWTTIQPSRNCCHTSRATLAS-CSPAETSLRSVTNCWRTKSKLQLVLVPLPH 420
M R+ T T I PSR C ++ LAS C P + +R+ CW +L LVLV
Sbjct: 1 MEREEEGGTGTVILPSRKCLSSTSPKLASGCCPWPSRMRACP-CWDAGIQL-LVLVSGGR 58
Query: 421 CQ 426
C+
Sbjct: 59 CR 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,098,880
Number of Sequences: 1657284
Number of extensions: 12149710
Number of successful extensions: 35145
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 34031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35125
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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