Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0493
(569 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 121 5e-28
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 120 6e-28
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 120 6e-28
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 33 0.12
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.49
07_01_0748 - 5735420-5735593,5735735-5735953,5736353-5736532,573... 30 1.1
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 29 2.6
12_02_1066 + 25785749-25785868,25785953-25786141,25786250-257864... 29 3.4
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 29 3.4
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 28 4.6
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 28 4.6
03_04_0243 + 19298293-19299117 28 4.6
11_01_0355 + 2679561-2680985,2681183-2682295 28 6.0
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 28 6.0
03_05_0907 + 28678909-28679253 28 6.0
11_08_0037 + 27859867-27860382,27860471-27861440,27861647-278619... 27 8.0
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 27 8.0
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 121 bits (291), Expect = 5e-28
Identities = 61/114 (53%), Positives = 79/114 (69%), Gaps = 2/114 (1%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
G +AP+ VV+P NTGL P +TSF Q L+IPTKI KGT+EII V ++K GDKV
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKV 170
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = +1
Query: 73 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMR 252
+ KA K Y K+ QLLDEY K I ADNVG Q+ +I LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 253 K 255
+
Sbjct: 64 R 64
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 120 bits (290), Expect = 6e-28
Identities = 61/114 (53%), Positives = 79/114 (69%), Gaps = 2/114 (1%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
G +AP+ VV+P NTGL P +TSF Q L+IPTKI KGT+EII V ++K GDKV
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKV 170
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = +1
Query: 73 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMR 252
+ KA K Y K+ QLLDEY K I ADNVG Q+ +I LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 253 K 255
+
Sbjct: 64 R 64
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 120 bits (290), Expect = 6e-28
Identities = 61/114 (53%), Positives = 79/114 (69%), Gaps = 2/114 (1%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
G +AP+ VV+P NTGL P +TSF Q L+IPTKI KGT+EII V ++K GDKV
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKV 170
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = +1
Query: 73 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTMMR 252
+ KA K Y K+ QLLDEY K I ADNVG Q+ +I LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 253 K 255
+
Sbjct: 64 R 64
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 33.5 bits (73), Expect = 0.12
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +3
Query: 270 LDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV---- 428
L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 396 LGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARLIS 455
Query: 429 VIPAHN--TGLGPEKTSFXQALSI 494
I HN G PEK S +L +
Sbjct: 456 FIADHNKLAGSLPEKMSNLSSLEL 479
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.49
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +3
Query: 282 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 440
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>07_01_0748 -
5735420-5735593,5735735-5735953,5736353-5736532,
5736602-5736739,5736852-5737052,5737859-5737986,
5738114-5738189,5738354-5738503,5738594-5739115,
5739208-5739357,5739559-5739807,5740249-5740440,
5740890-5740937,5741589-5741717,5741821-5741935,
5742044-5742159,5742341-5742415,5742562-5742696
Length = 998
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -2
Query: 283 GLLSRWSLMACASLCFF-P*ARYWSH--VARYXSAXSVXFPR 167
G++SR L AC SLC+F P R S V RY S + FP+
Sbjct: 2 GVISRKVLPACGSLCYFCPGLRARSRQPVKRYKSILAEIFPK 43
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLR 210
K R+ TLS+ ++ K I ++ Y ++ DN+ Q++ + L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 211 GSS-IVLMGKNTM 246
SS I L GK M
Sbjct: 63 SSSRIFLAGKKVM 75
>12_02_1066 +
25785749-25785868,25785953-25786141,25786250-25786414,
25786649-25786999,25787924-25788001,25788137-25788277,
25788415-25788459,25788597-25788763,25788833-25788911,
25788985-25789067,25789219-25789348,25789432-25789564,
25789955-25790103,25790339-25790534,25791086-25791288
Length = 742
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = -1
Query: 338 GEHEANVALDVWQQFLEGWIVVQVVFDGLRIIVFFPMSTILEPRSEIXICXICXXPTLSA 159
G+ + + + ++ L G + ++ G R +F + I EP S+ I I P +
Sbjct: 375 GKFMCTIDVKLPEEELGGLVTLKFWNQGSRAGQYFLSTVIYEPHSDAGISAIAFRPGKNM 434
Query: 158 PTMKHFGYSSKSWM 117
FG + K W+
Sbjct: 435 AVSSSFGGNFKVWV 448
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 235 KNTMMRKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPL 414
K+ MM ++W +QP +R L S + LR+V WR+ ++LQ + PL
Sbjct: 392 KSCMMAAVQSSSWADLQPELLGLVLTR--LPSLAD-RVRLRAVCRPWRSNARLQPLPPPL 448
Query: 415 P 417
P
Sbjct: 449 P 449
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 43 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSS- 219
S TLS+ ++ K I ++ Y ++ DN+ Q++ + L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 220 IVLMGKNTM 246
I L GK M
Sbjct: 203 IFLAGKKVM 211
>06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 180 TDXADXYLATWLQYRAHGKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEV 359
+D Y + ++ HGK D + L NP L + P + N +FTRGD ++
Sbjct: 1256 SDGRKEYYSKLVKADVHGK---DQEIYSIKLPGNPKLGEGKPENQ-NHAIIFTRGDAIQT 1311
Query: 360 RDKLLENKVQ 389
D +N ++
Sbjct: 1312 IDMNQDNYLE 1321
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 433 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 290
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 271 WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 393
W ++ HTS TL+ SP+ +S+ T+C+ + +
Sbjct: 480 WNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMM 520
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -1
Query: 410 GTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 282
G +WS F +LN +S H+ V L+ W + W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239
>03_05_0907 + 28678909-28679253
Length = 114
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 454 RPVLXAGMTTDNGAMAPGRAGA 389
RP+L NGA APG AGA
Sbjct: 53 RPLLHGSAAAANGASAPGNAGA 74
>11_08_0037 +
27859867-27860382,27860471-27861440,27861647-27861991,
27862074-27862693
Length = 816
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 294 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 395
KLLP VGFV RG V+ +K+++ P
Sbjct: 464 KLLPLDANKVGFVNVRGPHVQAPEKIMDGDYTGP 497
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 94 KSNYFVKIIQLLDEYPKCF 150
+++Y VKII+LL EY CF
Sbjct: 68 RADYKVKIIELLKEYVDCF 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,457,174
Number of Sequences: 37544
Number of extensions: 349192
Number of successful extensions: 911
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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