Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0493
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   149   1e-36
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    36   0.020
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    29   3.1  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   4.1  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  149 bits (362), Expect = 1e-36
 Identities = 71/112 (63%), Positives = 85/112 (75%)
 Frame = +3

Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
           GK     +A++ HL  NP+LEKLLPHI  NVGFVFT+ DL E+R KLLEN+  APA+ GA
Sbjct: 56  GKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGA 115

Query: 411 IAPLSVVIPAHNTGLGPEKTSFXQALSIPTKILKGTIEIIXGVHILKPGDKV 566
           IAP  V +P  NTG+GPEKTSF QAL IPTKI +GTIEI+  VH++K GDKV
Sbjct: 116 IAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKV 167



 Score = 90.6 bits (215), Expect = 7e-19
 Identities = 36/63 (57%), Positives = 52/63 (82%)
 Frame = +1

Query: 67  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGXQQIXQIXISLRGSSIVLMGKNTM 246
           M RED++TWK+NYF K+++L +EYPKC +VG DNVG +Q+ +I  ++RG + +LMGKNTM
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60

Query: 247 MRK 255
           +RK
Sbjct: 61  IRK 63


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 35.9 bits (79), Expect = 0.020
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = +3

Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPE 464
           L K    +KG  G +FT     EV  +  E   +  AR G +A  +VV+P    +     
Sbjct: 90  LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFS 149

Query: 465 KTSFXQALSIPTKILKGTIEIIXGVHILKPGD 560
                + L +PTK+ KG I +     + K G+
Sbjct: 150 MEPQLRKLGLPTKLDKGVITLYQQFEVCKEGE 181


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 445 LXAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 320
           + A  TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 187 IKAHETTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 22  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 135
           L+ K   S ++ +SR+ +EDK +  SN+++K  QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,343,328
Number of Sequences: 27780
Number of extensions: 273489
Number of successful extensions: 748
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)