Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0492
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 49 4e-06
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 47 1e-05
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 44 1e-04
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 44 1e-04
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 41 0.001
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 41 0.001
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 41 0.001
L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin fam... 36 0.020
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 36 0.020
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 35 0.046
L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin fam... 35 0.061
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 34 0.081
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 29 2.3
Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical pr... 29 4.0
X98132-1|CAA66831.1| 387|Caenorhabditis elegans N-acetyllactosa... 29 4.0
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 28 7.0
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 28 7.0
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 28 7.0
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 72.5 bits (170), Expect = 3e-13
Identities = 27/85 (31%), Positives = 46/85 (54%)
Frame = +2
Query: 254 LGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVD 433
LGCCGA++EN+C+ ++F+V L ++ E+A I GY H + L + +Y
Sbjct: 69 LGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHES 128
Query: 434 KNVQKTIDIIQTDLQCCGINSPADW 508
+ V+ D +CCG+ + +DW
Sbjct: 129 RGVESAWDKTHQLFECCGVTNSSDW 153
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 51 LEGGMSCVKYLMFCFNLLFAITGLIILIVG 140
+EGG++ VKYL+F NL+ + GL ++IVG
Sbjct: 2 VEGGVTIVKYLLFLANLVLWVGGLSLIIVG 31
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +2
Query: 257 GCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDK 436
GC G+++EN + +S L ++ +AE + G+ Y L++ + LN + Y D
Sbjct: 102 GCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVVGYRDDP 161
Query: 437 NVQKTIDIIQTDLQCCGINSPADW 508
++Q ID +Q CCGIN DW
Sbjct: 162 DLQLLIDSMQETWMCCGINGADDW 185
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 69 CVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN 176
CVKY +F FN++F + G +L+ G+ A+I ++N
Sbjct: 37 CVKYSVFSFNVIFFLLGFGLLLFGVWAQIEKNTFVN 72
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI-TQYPVD 433
GC GA K N C + F L++ F ELA + + K ++ V ++ +I +Y +
Sbjct: 74 GCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYSSE 133
Query: 434 KNVQKTIDIIQTDLQCCGINSPADW 508
+ D +Q +CCG+ + DW
Sbjct: 134 TAFKDAFDTVQEKFECCGVKTYTDW 158
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 251 VLGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPV 430
+LGCCG + +I +S+ + ++ VA L+ GI K L+ + LN + Y
Sbjct: 129 MLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVELSDALNYMVQHYYQ 188
Query: 431 DKN-VQKTIDIIQTDLQCCGINSPADWPI 514
VQ+++D +QT +CCG +D+ +
Sbjct: 189 GPGVVQESLDHLQTAFRCCGNAGCSDFRV 217
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 281 NHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNL-NASITQYPVDKNVQKTID 457
N C ++ + + L+ + E + + H E + +L N + Y +D N+ K ++
Sbjct: 92 NRCALVFYLLMLIFSMIMEGCLIYFTFSYHATYEQELNASLPNDILNNYNLDPNIAKAVN 151
Query: 458 IIQTDLQCCGINSPADWP 511
+Q D +CCG N+ DWP
Sbjct: 152 YLQRDSKCCGSNAFNDWP 169
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +2
Query: 254 LGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI------ 415
LG CGAV + +++ F +FL+ F+A++A+G + + D SV N+ +
Sbjct: 43 LGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLS-LFYKDKVYSVKENVREIVKSKYGV 101
Query: 416 -TQYPVDKNVQKTIDIIQTDLQCCGINSPADW 508
T P +K V + ID +Q +CCG P D+
Sbjct: 102 MTSEPENKMVTEFIDKLQFYEKCCGSLGPTDY 133
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/85 (24%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 GCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNASITQYP 427
G GA+++N ++ F+ + + ++ +AV + + + +TD + + N L ++ Y
Sbjct: 90 GFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYH 149
Query: 428 VDKNVQKTIDIIQTDLQCCGINSPA 502
++N+ + +D +Q +L+CCG++S A
Sbjct: 150 TNRNLAEIMDALQENLECCGVSSIA 174
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/85 (24%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 GCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNASITQYP 427
G GA+++N ++ F+ + + ++ +AV + + + +TD + + N L ++ Y
Sbjct: 114 GFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYH 173
Query: 428 VDKNVQKTIDIIQTDLQCCGINSPA 502
++N+ + +D +Q +L+CCG++S A
Sbjct: 174 TNRNLAEIMDALQENLECCGVSSIA 198
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +2
Query: 254 LGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTD----LEDSVMRNLN--ASI 415
+G G N ++ ++ F++++ + I G + + L S++ N+N A +
Sbjct: 65 VGYLGVSWSNKSLLYSYIGFVILLILVHGIARITGSLHKEEAKENLRKSMLHNINTTAVV 124
Query: 416 TQYPVDKNVQKTIDIIQTDLQCCGINSPADWPITV 520
T+ + + T D +Q +LQCCG+++ DW +V
Sbjct: 125 TKIGREIKLSLTWDHLQRELQCCGVDNYTDWHYSV 159
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +2
Query: 257 GCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDK 436
GCCGA E+ ++ F ++I+ EL + + S+ + L S Y + K
Sbjct: 85 GCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSSIQQVLKKSSATYELRK 144
Query: 437 NVQKTIDIIQTDLQCCG 487
N++ IQ QCCG
Sbjct: 145 NIKP----IQNVFQCCG 157
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Frame = +2
Query: 254 LGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY----MKHTDLEDSVMRNL------ 403
LGCCGA KE ++ +S L++I ++A I + M D D + +L
Sbjct: 99 LGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLHSHMFENDFRDILHSSLKMYNGT 158
Query: 404 -NASITQYPVDKNVQKTI-DIIQTDLQCCGINS 496
N ++ P D + KT D I + CCG++S
Sbjct: 159 DNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVDS 191
Score = 30.7 bits (66), Expect = 1.00
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 72 VKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN 176
+K+ +F FNL+F + GLI L +G+ ++ Y N
Sbjct: 18 LKFSLFIFNLVFLLCGLICLGIGLWLVLDKYAIDN 52
>L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin family
protein 2 protein.
Length = 234
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 251 VLGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN-ASITQYP 427
++G GA+ + ++ T V ++I F+ EL IA + K L + R N +T
Sbjct: 86 IIGLIGAISQKKPVLATCLVLIVIFFIMELGGSIALWSKRGSLRSLLYRFANDIYLTNSV 145
Query: 428 VDKNVQKTIDIIQTDLQCCGI 490
D I IIQ CCG+
Sbjct: 146 FD------ISIIQNTYNCCGV 160
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 VLGCCGAVKENHCMIITFSVFLLIIFVAELA--VGIAGYMKHTD--LEDSVMRNLNASIT 418
VLG CG SV L+++F+ + V I ++ + D + V + +
Sbjct: 77 VLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKIVAIVMFLANNDHLRREFVGVYRDELVA 136
Query: 419 QYPVDKNVQKTIDIIQTDLQCCGINSPADW 508
Y + + T+D + T L+CCG N D+
Sbjct: 137 NYHNNSRTKNTLDWVHTSLKCCGANGCEDF 166
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 35.1 bits (77), Expect = 0.046
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 254 LGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVD 433
+G GAV + ++ + +F++I+F+ E+A+GI +K + +V + S +
Sbjct: 87 VGVIGAVIRSKYLLAPYFLFMVILFLLEIAIGITVLVKRRSVRRTVKEYVFDSF-----N 141
Query: 434 KNVQKTIDIIQTDLQCCG 487
N Q I CCG
Sbjct: 142 MNAQADISAFNFRYNCCG 159
>L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin family
protein 1 protein.
Length = 244
Score = 34.7 bits (76), Expect = 0.061
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 251 VLGCCGAV-KENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYP 427
VLG +V + +IT+ V ++++ E+ G+A ++ L D+ ++A T
Sbjct: 86 VLGMISSVWPKRKGFMITYLVLIIVLVSLEIGCGVAVLVRRNSLHDNTNSLIDAMYT--- 142
Query: 428 VDKNVQKTIDIIQTDLQCCGINS 496
N + IIQ CCGI +
Sbjct: 143 --TNSVNDLKIIQDKYNCCGIEN 163
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 34.3 bits (75), Expect = 0.081
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 VLGCCGAVKENHCMIITFSVFLLIIFVAELA--VGIAGYMKHTD--LEDSVMRNLNASIT 418
VLG CG SV L+++F+ + V I ++ + D + V + +
Sbjct: 66 VLGLCGCFAVCFGSKTALSVHLVLVFLVFVVKIVAIVMFLANKDHLRREFVGVYRDELVA 125
Query: 419 QYPVDKNVQKTIDIIQTDLQCCGINSPADW 508
Y + + T+D + T L+CCG N D+
Sbjct: 126 NYHNNSRTKNTLDWVHTSLKCCGANGCEDF 155
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 257 GCCGAVKENHCMIITFSVFLLIIFVAELAVGI 352
GCCG + +I +S+ + ++ VA L+ GI
Sbjct: 242 GCCGITGRSRPFLIIYSMVVFLLLVATLSCGI 273
>Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical
protein F53B6.1 protein.
Length = 258
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 275 KENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN--ASITQ-YPVD--KN 439
KE C + + +V ++I V + G G L NL S+ + Y K
Sbjct: 84 KEMRCFVTSCAVASIVIAVMLIIGGCIGLNFRDQLTHYTPLNLKMLTSLRELYGTHDMKG 143
Query: 440 VQKTIDIIQTDLQCCGIN 493
+ ++ D +Q++ +CCG+N
Sbjct: 144 ITESWDALQSNFKCCGVN 161
>Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical
protein W02B12.11 protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 272 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-PVDKNVQK 448
++ +HC+I +FS LIIFVA + ++++ L D R + A+ Q V+ NVQ+
Sbjct: 1 MRTSHCIIRSFSPKRLIIFVAASTLIYVMLLRNSTLNDE--RRIAATEEQVRSVNVNVQQ 58
Query: 449 T 451
+
Sbjct: 59 S 59
>X98132-1|CAA66831.1| 387|Caenorhabditis elegans
N-acetyllactosamine synthase protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 272 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-PVDKNVQK 448
++ +HC+I +FS LIIFVA + ++++ L D R + A+ Q V+ NVQ+
Sbjct: 1 MRTSHCIIRSFSPKRLIIFVAASTLIYVMLLRNSTLNDE--RRIAATEEQVRSVNVNVQQ 58
Query: 449 T 451
+
Sbjct: 59 S 59
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 424 ILSNGSVQVAHNRIFQVRMLHVTSDAHSQFSHEYDQEEY*KRYYH---AVVLFDSATAAE 254
+L++ S V H +I TS AH +FSH Q+ + +H AV+ ++ T
Sbjct: 75 VLTSSSSPVVHRKISPSSSAPSTSSAHRRFSH-LPQQHFHHHIHHNQTAVISEETLTTPR 133
Query: 253 NATM 242
+T+
Sbjct: 134 ASTL 137
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 424 ILSNGSVQVAHNRIFQVRMLHVTSDAHSQFSHEYDQEEY*KRYYH---AVVLFDSATAAE 254
+L++ S V H +I TS AH +FSH Q+ + +H AV+ ++ T
Sbjct: 75 VLTSSSSPVVHRKISPSSSAPSTSSAHRRFSH-LPQQHFHHHIHHNQTAVISEETLTTPR 133
Query: 253 NATM 242
+T+
Sbjct: 134 ASTL 137
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 424 ILSNGSVQVAHNRIFQVRMLHVTSDAHSQFSHEYDQEEY*KRYYH---AVVLFDSATAAE 254
+L++ S V H +I TS AH +FSH Q+ + +H AV+ ++ T
Sbjct: 75 VLTSSSSPVVHRKISPSSSAPSTSSAHRRFSH-LPQQHFHHHIHHNQTAVISEETLTTPR 133
Query: 253 NATM 242
+T+
Sbjct: 134 ASTL 137
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 284 HCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYP 427
H + + S LLII A G+ + H +D V+RN+N I Q P
Sbjct: 568 HAIRLIRSGGLLIINQALNGGGVMSSIDHMTNDDRVIRNMNIRIKQDP 615
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,695,499
Number of Sequences: 27780
Number of extensions: 292696
Number of successful extensions: 967
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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