BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0490 (593 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_56628| Best HMM Match : Actin (HMM E-Value=0) 126 2e-29 SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28 SB_56| Best HMM Match : Actin (HMM E-Value=0) 123 1e-28 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 9e-28 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 58 4e-09 SB_54| Best HMM Match : Actin (HMM E-Value=0) 58 5e-09 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.008 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 36 0.033 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 33 0.17 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.53 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9 SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 126 bits (303), Expect = 2e-29 Identities = 57/62 (91%), Positives = 59/62 (95%) Frame = +3 Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251 MCD++ AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 252 SK 257 SK Sbjct: 61 SK 62 Score = 123 bits (296), Expect = 1e-28 Identities = 58/69 (84%), Positives = 58/69 (84%) Frame = +2 Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439 GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123 Query: 440 MFXTFXXXA 466 MF TF A Sbjct: 124 MFETFNSPA 132 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 123 bits (296), Expect = 1e-28 Identities = 58/69 (84%), Positives = 58/69 (84%) Frame = +2 Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439 GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123 Query: 440 MFXTFXXXA 466 MF TF A Sbjct: 124 MFETFNSPA 132 Score = 122 bits (293), Expect = 3e-28 Identities = 57/62 (91%), Positives = 58/62 (93%) Frame = +3 Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251 M D+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 252 SK 257 SK Sbjct: 61 SK 62 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 123 bits (296), Expect = 1e-28 Identities = 58/69 (84%), Positives = 58/69 (84%) Frame = +2 Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439 GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122 Query: 440 MFXTFXXXA 466 MF TF A Sbjct: 123 MFETFNSPA 131 Score = 118 bits (285), Expect = 3e-27 Identities = 54/60 (90%), Positives = 57/60 (95%) Frame = +3 Query: 78 DEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQSK 257 +++ AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQSK Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 123 bits (296), Expect = 1e-28 Identities = 58/69 (84%), Positives = 58/69 (84%) Frame = +2 Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439 GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122 Query: 440 MFXTFXXXA 466 MF TF A Sbjct: 123 MFETFNSPA 131 Score = 120 bits (288), Expect = 1e-27 Identities = 55/60 (91%), Positives = 57/60 (95%) Frame = +3 Query: 78 DEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQSK 257 ++E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQSK Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 123 bits (296), Expect = 1e-28 Identities = 58/69 (84%), Positives = 58/69 (84%) Frame = +2 Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439 GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123 Query: 440 MFXTFXXXA 466 MF TF A Sbjct: 124 MFETFNSPA 132 Score = 122 bits (294), Expect = 2e-28 Identities = 56/62 (90%), Positives = 58/62 (93%) Frame = +3 Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251 M D++ AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 252 SK 257 SK Sbjct: 61 SK 62 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 120 bits (289), Expect = 9e-28 Identities = 55/60 (91%), Positives = 57/60 (95%) Frame = +3 Query: 78 DEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQSK 257 D++ AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQSK Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Score = 53.6 bits (123), Expect = 1e-07 Identities = 24/28 (85%), Positives = 24/28 (85%) Frame = +2 Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTF 343 GILTLKYPIEHGIVTN DDMEKI TF Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIMFETF 90 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 61.3 bits (142), Expect = 6e-10 Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Frame = +2 Query: 263 ILTLKYPIEHGIVTNXDDMEKIXHHTF-YNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439 +L + YP+++GIV N DDM+ + +TF +++ + P VLLT PL P NREKM ++ Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126 Query: 440 MFXTF 454 MF + Sbjct: 127 MFENY 131 Score = 47.2 bits (107), Expect = 1e-05 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%) Frame = +3 Query: 90 AALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGXEA 248 + +V DNG+G K G+AG + P +FPS+VGRP R + + KD VG EA Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 58.4 bits (135), Expect = 4e-09 Identities = 27/39 (69%), Positives = 28/39 (71%) Frame = +3 Query: 81 EEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 197 E LV D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 58.0 bits (134), Expect = 5e-09 Identities = 23/34 (67%), Positives = 29/34 (85%) Frame = +3 Query: 96 LVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 197 +V DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 Score = 51.2 bits (117), Expect = 6e-07 Identities = 24/44 (54%), Positives = 31/44 (70%) Frame = +2 Query: 323 KIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQIMFXTF 454 K+ H F ++LRV E+ PVLLT PL PK NRE+M Q+MF +F Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESF 2172 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 51.2 bits (117), Expect = 6e-07 Identities = 21/49 (42%), Positives = 31/49 (63%) Frame = +3 Query: 66 FKMCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 212 FK+ A+V DNG G+ K GFAGD PR + P++VG P+ +++G Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 44.4 bits (100), Expect = 7e-05 Identities = 22/39 (56%), Positives = 27/39 (69%) Frame = -1 Query: 194 MAGPSDDRGEYGARSIISCETGLAHTGAIVXYQRGXFLV 78 MA +DD GE G+ SI+S ETGLAHTGAI+ Q +V Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 37.5 bits (83), Expect = 0.008 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +2 Query: 371 EXPVLLTXXPLXPKXNREKMTQIMFXTFXXXA 466 + PVLLT PL P+ NREK ++ F TF A Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPA 157 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 35.5 bits (78), Expect = 0.033 Identities = 16/62 (25%), Positives = 32/62 (51%) Frame = +2 Query: 281 PIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQIMFXTFXX 460 PI+ G++ + D EKI + + ++ P+L++ + REK+T++MF + Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62 Query: 461 XA 466 A Sbjct: 63 PA 64 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 33.1 bits (72), Expect = 0.17 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +2 Query: 275 KYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPL 403 K+PI H IV + D ME+ + LR PE+ LL L Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLLAVLAL 341 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.53 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -2 Query: 169 GNTARGASSPAKPALHIPEPLSXT 98 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.53 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -2 Query: 169 GNTARGASSPAKPALHIPEPLSXT 98 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 1.2 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -2 Query: 169 GNTARGASSPAKPALHIPEPLSXT 98 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 4.9 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 Query: 169 GNTARGASSPAKPALHIPEPLSXT 98 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 4.9 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 Query: 169 GNTARGASSPAKPALHIPEPLSXT 98 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 >SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3142 Score = 27.9 bits (59), Expect = 6.5 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -1 Query: 260 LFALCLVTYVRVLLSHTDHHALMAGPSDDRGEYGARSIISCETGLAHT 117 L LC T ++LSH + H L ++G R +SCET L T Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,427,543 Number of Sequences: 59808 Number of extensions: 337982 Number of successful extensions: 757 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 756 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1427401750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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