Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0490
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 127 7e-30
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 127 7e-30
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 127 7e-30
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 127 7e-30
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 127 7e-30
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 127 7e-30
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 127 7e-30
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 127 7e-30
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 126 2e-29
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 126 2e-29
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 126 2e-29
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 125 2e-29
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 123 1e-28
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 123 1e-28
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 122 1e-28
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 77 1e-14
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 65 3e-11
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 57 8e-09
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 45 5e-05
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 28 5.8
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 28 5.8
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 28 5.8
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 28 5.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.8
AF288812-1|AAG10199.1| 566|Caenorhabditis elegans synembryn pro... 27 7.6
AC084158-34|AAK68564.1| 566|Caenorhabditis elegans Resistance t... 27 7.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 127 bits (306), Expect = 7e-30
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 124 MFETFNTPA 132
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 127 bits (306), Expect = 7e-30
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 124 MFETFNTPA 132
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 127 bits (306), Expect = 7e-30
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 124 MFETFNTPA 132
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 127 bits (306), Expect = 7e-30
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 124 MFETFNTPA 132
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 127 bits (306), Expect = 7e-30
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 124 MFETFNTPA 132
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 127 bits (306), Expect = 7e-30
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 124 MFETFNTPA 132
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 127 bits (306), Expect = 7e-30
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKI 328
GILTLKYPIEHGIVTN DDMEKI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 127 bits (306), Expect = 7e-30
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD+E AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKI 328
GILTLKYPIEHGIVTN DDMEKI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKI 86
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 126 bits (303), Expect = 2e-29
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD++ AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 124 MFETFNTPA 132
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 126 bits (303), Expect = 2e-29
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD++ AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKI 328
GILTLKYPIEHGIVTN DDMEKI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 126 bits (303), Expect = 2e-29
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD++ AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 44.4 bits (100), Expect = 6e-05
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDM 319
GILTLKYPIEHGIVTN DDM
Sbjct: 64 GILTLKYPIEHGIVTNWDDM 83
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 125 bits (302), Expect = 2e-29
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQ 251
MCD++ AAL+ DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 252 SK 257
SK
Sbjct: 61 SK 62
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 124 MFETFNTPA 132
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 20 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 79
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 80 MFETFNTPA 88
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 204 MVGMGQKDSYVGXEAQSK 257
MVGMGQKDSYVG EAQSK
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 123 bits (296), Expect = 1e-28
Identities = 58/69 (84%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELRVAPEE PVLLT PL PK NREKMTQI
Sbjct: 50 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 109
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 110 MFETFNTPA 118
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +3
Query: 126 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQSK 257
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQSK
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 122 bits (295), Expect = 1e-28
Identities = 57/69 (82%), Positives = 58/69 (84%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
GILTLKYPIEHGIVTN DDMEKI HHTFYNELR+APEE PVLLT PL PK NREKMTQI
Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQI 122
Query: 440 MFXTFXXXA 466
MF TF A
Sbjct: 123 MFETFNTPA 131
Score = 121 bits (291), Expect = 4e-28
Identities = 56/60 (93%), Positives = 57/60 (95%)
Frame = +3
Query: 78 DEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQSK 257
+EE AALV DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG EAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +2
Query: 260 GILTLKYPIEHGIVTNXDDMEKIXHHTF-YNELRVAPEEXPVLLTXXPLXPKXNREKMTQ 436
G+ +++YP+EHGIV N DMEKI + F ++L++ PEE PVLLT PL P NRE+ +
Sbjct: 66 GLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAE 125
Query: 437 IMFXTFXXXA 466
I F TF A
Sbjct: 126 IFFETFNVPA 135
Score = 57.2 bits (132), Expect = 8e-09
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +3
Query: 96 LVXDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGXEAQS 254
+V DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +2
Query: 263 ILTLKYPIEHGIVTNXDDMEKIXHHTFYNE-LRVAPEEXPVLLTXXPLXPKXNREKMTQI 439
+L + YP+++GIV N DDM + HTF E L + P+E +LLT PL P NREKM Q+
Sbjct: 67 MLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQV 126
Query: 440 MFXTF 454
MF +
Sbjct: 127 MFEQY 131
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 96 LVXDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGXE 245
+V DNG+G K G+AG + P +FPS+VGRP R + + KD VG E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 57.2 bits (132), Expect = 8e-09
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +2
Query: 269 TLKYPIEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQIMFX 448
T+KYPI HGIV + D ME+ + LR PE+ LLT PL NRE +IMF
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 449 TF 454
+F
Sbjct: 140 SF 141
Score = 34.3 bits (75), Expect = 0.066
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 72 MCDEEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIV 179
M + A V DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +2
Query: 284 IEHGIVTNXDDMEKIXHHTFYNELRVAPEEXPVLLTXXPLXPKXNREKMTQIMFXTFXXX 463
++ G++ + + EKI H++ N L P E PVL + + REK+T+IMF F
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 464 AH 469
A+
Sbjct: 154 AY 155
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 81 EEXAALVXDNGSGMCKAGFAGDDAPRAVFPSIV 179
+E + LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -2
Query: 238 PTYESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSXTNAA 89
PTY++F T P P+ G+ + AS P + + H P+ ++ +A+
Sbjct: 671 PTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSAS 720
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -2
Query: 238 PTYESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSXTNAA 89
PTY++F T P P+ G+ + AS P + + H P+ ++ +A+
Sbjct: 671 PTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSAS 720
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -2
Query: 238 PTYESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSXTNAA 89
PTY++F T P P+ G+ + AS P + + H P+ ++ +A+
Sbjct: 671 PTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSAS 720
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -2
Query: 238 PTYESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSXTNAA 89
PTY++F T P P+ G+ + AS P + + H P+ ++ +A+
Sbjct: 575 PTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSAS 624
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 126 KAGFAGDDAPRAVFPSIVGRPRHQG 200
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF288812-1|AAG10199.1| 566|Caenorhabditis elegans synembryn
protein.
Length = 566
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 212 TDHHALMAGPSDDRGEYGARSIISCETGLAHTGAI 108
+DH + +AG S+++ EY A ++ + TG +
Sbjct: 494 SDHGSALAGMSEEQKEYEAMKLVDAMNQMMETGIV 528
>AC084158-34|AAK68564.1| 566|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 8, isoform a
protein.
Length = 566
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 212 TDHHALMAGPSDDRGEYGARSIISCETGLAHTGAI 108
+DH + +AG S+++ EY A ++ + TG +
Sbjct: 494 SDHGSALAGMSEEQKEYEAMKLVDAMNQMMETGIV 528
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,202,865
Number of Sequences: 27780
Number of extensions: 222303
Number of successful extensions: 587
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -