Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0490
         (593 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   3.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.9  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   6.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.1  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -1

Query: 272 GSGYLFALCLVTYVRVLLSHTDHHALMAGPSDDRGEYGARSIISC 138
           GS Y+         RVLL+ TD   +    S D  EYG     +C
Sbjct: 329 GSNYMQTRVPAWCDRVLLNPTDKMLVQDISSPDAVEYGIIGPTTC 373


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +2

Query: 497 RCXAPVVPPVSWLDSGERWSXTA 565
           R   P +  ++W + G+ W+  A
Sbjct: 46  RVAQPALANITWYNEGQAWNIEA 68


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +2

Query: 497 RCXAPVVPPVSWLDSGERWSXTA 565
           R   P +  ++W + G+ W+  A
Sbjct: 46  RVAQPALANITWYNEGQAWNIEA 68


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 135 NRPCTYRSHCLLPTRQXPR 79
           N   TY + CLL  ++ PR
Sbjct: 478 NMAATYMNECLLNIQKSPR 496


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 117 GMCKAGFAGD 146
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -1

Query: 215  HTDHHALMAGPSDDRGEYGARSIISCETG 129
            H   H      +DD+  +  R ++SC +G
Sbjct: 1686 HCTIHRTQVKETDDKICFTMRPVVSCASG 1714


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,926
Number of Sequences: 438
Number of extensions: 2791
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)