Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0487
         (805 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g75270.1 68414.m08744 dehydroascorbate reductase, putative si...    31   0.90 
At5g17220.1 68418.m02018 glutathione S-transferase, putative           30   1.6  
At1g15830.1 68414.m01900 expressed protein                             29   3.6  
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea...    28   6.3  
At5g66960.1 68418.m08442 prolyl oligopeptidase family protein si...    28   8.3  

>At1g75270.1 68414.m08744 dehydroascorbate reductase, putative
           similar to GI:6939839 from [Oryza sativa]
          Length = 213

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
 Frame = +1

Query: 103 SQRLLLAYGGQE--FEDNRISSENWPE-FKPKTPFGQMPVLEIDGKQYAQSTAIAG 261
           SQR+LL    ++  ++ + I+  + P+ F   +P G++PV+++DGK  A S  I G
Sbjct: 23  SQRVLLTLEEKKLPYKTHLINVSDKPQWFLDISPEGKVPVVKLDGKWVADSDVIVG 78


>At5g17220.1 68418.m02018 glutathione S-transferase, putative
          Length = 214

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
 Frame = +1

Query: 106 QRLLLAY--GGQEFEDNRISSENWPEFKP----KTPFGQMPVLEIDGKQYAQSTAIA 258
           QR+LL +   G EFE   I  + + + KP    + PFGQ+P +E    +  +S AIA
Sbjct: 15  QRVLLCFLEKGIEFEIIHIDLDTFEQKKPEHLLRQPFGQVPAIEDGDFKLFESRAIA 71


>At1g15830.1 68414.m01900 expressed protein
          Length = 483

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +2

Query: 524 GHVRLPEGDAPEAGSGAE--VPGLQEAHRGGSGHPQXQG 634
           G   +P    P+ G G E  +PG     RGG G P   G
Sbjct: 131 GEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 169



 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +2

Query: 524 GHVRLPEGDAPEAGSGAE--VPGLQEAHRGGSGHPQXQG 634
           G   +P    P+ G G E  +PG     RGG G P   G
Sbjct: 147 GEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 185



 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +2

Query: 524 GHVRLPEGDAPEAGSGAE--VPGLQEAHRGGSGHPQXQG 634
           G   +P    P+ G G E  +PG     RGG G P   G
Sbjct: 163 GEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 201



 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +2

Query: 524 GHVRLPEGDAPEAGSGAE--VPGLQEAHRGGSGHPQXQG 634
           G   +P    P+ G G E  +PG     RGG G P   G
Sbjct: 179 GEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 217



 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +2

Query: 524 GHVRLPEGDAPEAGSGAE--VPGLQEAHRGGSGHPQXQG 634
           G   +P    P+ G G E  +PG     RGG G P   G
Sbjct: 195 GEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 233


>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
           family protein similar to WD-repeat protein mip1
           (SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
           PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
          Length = 1344

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +1

Query: 49  PTMPNVKFYXFPVKALGESQRLLLAYGGQEFEDNRISSENWPEFKPKTPFGQMPVLEID 225
           PT+  V+      +   +++R+L  Y G        + E W   K  T +  +P+ E+D
Sbjct: 174 PTVDEVRKLCLTCRKYAKTERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPISELD 232


>At5g66960.1 68418.m08442 prolyl oligopeptidase family protein
           similar to OpdB [Treponema denticola] GI:13786054;
           contains Pfam profiles PF00326: prolyl oligopeptidase
           family, PF02897: Prolyl oligopeptidase, N-terminal
           beta-propeller domain
          Length = 792

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 164 KTGQNSNLRLRSVRCRCWKSTASSTLRAPPLQVPR 268
           +T    N R R  +CRC+K   S     PP  +P+
Sbjct: 7   RTFSRHNCRFRRQQCRCYKPPKSPPPPPPPPALPK 41


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,992,230
Number of Sequences: 28952
Number of extensions: 251539
Number of successful extensions: 634
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)