Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0486
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.70 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.5  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
 Frame = +1

Query: 292 GMFVRLVHF*FQNETIKRTNAPVRSVV-YVILYVPCAILKFY------SLKRIIIF-HMV 447
           G+F  ++ F      + +T   V +V  +V  Y P A + FY      S++ III  H V
Sbjct: 82  GLFC-ILKFALDGLMLDKTGICVSNVFDFVHFYYPVATMSFYVLNFFGSIQFIIISKHWV 140

Query: 448 FLFKHYMF*RERFMRNLG 501
            + K + F  E  MRN G
Sbjct: 141 TIMKEWSF-MEMSMRNYG 157


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 328 NETIKRTNAPVRSVVYVILYVPCAILKFY 414
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 328 NETIKRTNAPVRSVVYVILYVPCAILKFY 414
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = +1

Query: 103 FVIGRINFLVLXILKFFICSLVLRVACV 186
           F+I  ++ L L  + +F C+L++ + C+
Sbjct: 272 FIIFTMHLLFLLCIYYFYCALII-LLCI 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,717
Number of Sequences: 336
Number of extensions: 2595
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)