Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0485
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 175 3e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 175 3e-44
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 156 1e-38
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 146 2e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 136 1e-32
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 107 9e-24
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 3e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 3e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 6e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 6e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 6e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.010
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.17
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.39
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 32 0.39
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 31 0.69
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.69
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 1.2
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.2
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 1.2
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.1
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.8
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.8
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 29 4.8
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 29 4.8
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 175 bits (426), Expect = 3e-44
Identities = 90/140 (64%), Positives = 100/140 (71%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPSYIKKIGLQPSCCRFR 615
QTREHALLA TLGVKQLIV NKM + + +IKKIG P F
Sbjct: 132 QTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF- 190
Query: 616 APFLGWHRGTTCWSLSTKMP 675
P G++ G +S+ MP
Sbjct: 191 VPISGFN-GDNMLEVSSNMP 209
Score = 146 bits (353), Expect = 2e-35
Identities = 67/70 (95%), Positives = 67/70 (95%)
Frame = +2
Query: 44 MGKEKTHINIVXIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIV IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAEREXG 253
DKLKAERE G
Sbjct: 61 DKLKAERERG 70
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 175 bits (426), Expect = 3e-44
Identities = 90/140 (64%), Positives = 100/140 (71%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPSYIKKIGLQPSCCRFR 615
QTREHALLA TLGVKQLIV NKM + + +IKKIG P F
Sbjct: 132 QTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF- 190
Query: 616 APFLGWHRGTTCWSLSTKMP 675
P G++ G +S+ MP
Sbjct: 191 VPISGFN-GDNMLEVSSNMP 209
Score = 146 bits (353), Expect = 2e-35
Identities = 67/70 (95%), Positives = 67/70 (95%)
Frame = +2
Query: 44 MGKEKTHINIVXIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIV IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAEREXG 253
DKLKAERE G
Sbjct: 61 DKLKAERERG 70
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 156 bits (379), Expect = 1e-38
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLI 489
QTREHALLA TLGVKQL+
Sbjct: 132 QTREHALLAQTLGVKQLV 149
Score = 146 bits (353), Expect = 2e-35
Identities = 67/70 (95%), Positives = 67/70 (95%)
Frame = +2
Query: 44 MGKEKTHINIVXIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIV IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAEREXG 253
DKLKAERE G
Sbjct: 61 DKLKAERERG 70
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 146 bits (353), Expect = 2e-35
Identities = 67/70 (95%), Positives = 67/70 (95%)
Frame = +2
Query: 44 MGKEKTHINIVXIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIV IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAEREXG 253
DKLKAERE G
Sbjct: 61 DKLKAERERG 70
Score = 98.3 bits (234), Expect = 5e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 393
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSFIHQEDWATTQLLSLSCPISGMAPGNNMLE 656
STEPP+SE RF EI EVS ++ + + PISG G+NMLE
Sbjct: 123 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF-VPISGF-NGDNMLE 169
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 136 bits (330), Expect = 1e-32
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = +2
Query: 44 MGKEKTHINIVXIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIV IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAER 244
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 113 bits (271), Expect = 2e-25
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 235 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 294
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QT+EHALL +LGV QLIV VNK+
Sbjct: 295 QTKEHALLLRSLGVTQLIVAVNKL 318
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +2
Query: 53 EKTHINIVXIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 232
+K IN++ +GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 233 KAEREXG 253
+ ERE G
Sbjct: 227 EEERERG 233
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 113 bits (271), Expect = 2e-25
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 253 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 312
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QT+EHALL +LGV QLIV VNK+
Sbjct: 313 QTKEHALLLRSLGVTQLIVAVNKL 336
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +2
Query: 53 EKTHINIVXIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 232
+K IN++ +GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 233 KAEREXG 253
+ ERE G
Sbjct: 245 EEERERG 251
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 107 bits (257), Expect = 9e-24
Identities = 49/114 (42%), Positives = 71/114 (62%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + G
Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233
Query: 436 QTREHALLAFTLGVKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPSYIKKIGLQP 597
QTREH++L T GVK L++ VNKM ++ K +++K+G P
Sbjct: 234 QTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNP 287
Score = 81.0 bits (191), Expect = 9e-16
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +2
Query: 47 GKEKTHINIVXIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 226
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 227 KLKAEREXG 253
ERE G
Sbjct: 164 TNDEEREKG 172
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 436 QTREHALLAFTLGVKQLIVGVNK 504
QT+EH +LA +GVK + + +NK
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 56 KTHINIVXIGHVDSGKSTTT 115
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 436 QTREHALLAFTLGVKQLIVGVNK 504
QT+EH +LA +GVK + + +NK
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 56 KTHINIVXIGHVDSGKSTTT 115
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 99 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 151
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKV 177
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 50 KEKTHINIVXIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 221 LDKLKAER 244
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKV 178
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 50 KEKTHINIVXIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 221 LDKLKAER 244
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKV 178
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 50 KEKTHINIVXIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 221 LDKLKAER 244
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 480
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 481 QLIVGVNKMVPLNHHTVSPDLRKSRR 558
++I+ +NK +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.5 bits (83), Expect = 0.010
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 480
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 481 QLIVGVNKM 507
QL+V VNK+
Sbjct: 258 QLVVAVNKI 266
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 503 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 375
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 295 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 474
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 475 VKQLIVGVNKM 507
+ Q+I +NK+
Sbjct: 155 I-QIIPVINKI 164
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 68 NIVXIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 184
N + HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 68 NIVXIGHVDSGKSTTTGHLIYKCGGI 145
NI I HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 31.5 bits (68), Expect = 0.69
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 68 NIVXIGHVDSGKSTTTGHLIYKCGGID 148
NI H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +1
Query: 298 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 477
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 478 KQLIVGVNKM 507
L++ NK+
Sbjct: 182 NHLMILQNKV 191
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 44 MGKEKTHINIVXIGHVDSGKSTTTGHLIYKCG 139
M +++ N+ I HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 259 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 44 MGKEKTHINIVXIGHVDSGKSTTTGHLIYKCG 139
M +++ N+ I HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 259 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVLIV 390
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 23 VIRD*PKMGKEKTHINIVXIGHVDSGKSTTTGHLIY 130
+IRD P K+ + +G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 23 VIRD*PKMGKEKTHINIVXIGHVDSGKSTTTGHLIY 130
+IRD P K+ + +G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 489 RRSKQNGSTEPPYSEPRFEEIKKEVSFIHQEDWATTQLLSLSCPISGMAPGNNMLEPFNQ 668
R+SK+N E + + + ++ HQ+D+ + L + P+ G AP N +P Q
Sbjct: 349 RKSKRNSQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWN-QMPV-GYAPPGNFTQPQQQ 406
Query: 669 N 671
+
Sbjct: 407 H 407
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 489 RRSKQNGSTEPPYSEPRFEEIKKEVSFIHQEDWATTQLLSLSCPISGMAPGNNMLEPFNQ 668
R+SK+N E + + + ++ HQ+D+ + L + P+ G AP N +P Q
Sbjct: 349 RKSKRNSQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWN-QMPV-GYAPPGNFTQPQQQ 406
Query: 669 N 671
+
Sbjct: 407 H 407
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 301 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 396
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,136,238
Number of Sequences: 27780
Number of extensions: 396862
Number of successful extensions: 1181
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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