Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0484
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10986-1|AAR25648.1|  779|Caenorhabditis elegans Abnormal cell m...    33   0.20 
Z46828-1|CAA86856.1|  542|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z69904-2|CAD57718.1|  298|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z75541-6|CAA99857.2|  644|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF440800-1|AAL28139.1|  644|Caenorhabditis elegans transcription...    28   7.4  
AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U40060-7|AAA81145.2|  391|Caenorhabditis elegans Hypothetical pr...    27   9.8  
L10986-2|AAK84523.2|  667|Caenorhabditis elegans Abnormal cell m...    27   9.8  
AL132949-25|CAB61103.1|  209|Caenorhabditis elegans Hypothetical...    27   9.8  
AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and cap...    27   9.8  

>L10986-1|AAR25648.1|  779|Caenorhabditis elegans Abnormal cell
           migration protein10, isoform c protein.
          Length = 779

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 27/97 (27%), Positives = 43/97 (44%)
 Frame = -3

Query: 416 VEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELVGVDEVSPRGS 237
           +EA   + + E A  +    P     EN E  SV  D+ DF   + +++    +V P+  
Sbjct: 80  LEADTEEDIAETADDEESKDPVEKT-ENFEP-SVTMDTYDFPDPYPVQIRARPQVPPKPP 137

Query: 236 MPILYISMNCLTTSTFMYLSQLFSMLYSLAISLMSSN 126
           +  +  SMN +  S    L +L   L +L   L SSN
Sbjct: 138 IDTVRYSMNNIKESADWQLDELLEELEALETQLNSSN 174


>Z46828-1|CAA86856.1|  542|Caenorhabditis elegans Hypothetical
           protein R03D7.2 protein.
          Length = 542

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 25/62 (40%), Positives = 32/62 (51%)
 Frame = -3

Query: 404 GSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELVGVDEVSPRGSMPIL 225
           GS +V E A+V PF +  +   E +EV   V+  ED D    L L  V E  PRG +P L
Sbjct: 137 GSNTVSEPANV-PFQNLLQPGLEGMEV---VQQEEDMDIDEELLLGPVAEEEPRGYVPPL 192

Query: 224 YI 219
            I
Sbjct: 193 VI 194


>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +1

Query: 370 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 507
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>Z69904-2|CAD57718.1|  298|Caenorhabditis elegans Hypothetical
           protein ZK20.2 protein.
          Length = 298

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -1

Query: 619 SGXLLYASXSTTKLSSVTRDAV--VFPEDRVLGGFSHLHI 506
           SG +++ +   TK+ ++T+D +     E RV+  F+H HI
Sbjct: 115 SGKMIHVAIKKTKMRNLTKDQIKEFMQEARVMRSFAHPHI 154


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 350 RSPHENIEVLSVVEDSEDFD 291
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>Z75541-6|CAA99857.2|  644|Caenorhabditis elegans Hypothetical
           protein F52B5.5a protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +1

Query: 145 IAKEYNIEKSCDKYMNVDVVKQ 210
           +  + N+ + C+K+M +DV+KQ
Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233


>AF440800-1|AAL28139.1|  644|Caenorhabditis elegans transcription
           factor CEP-1 protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +1

Query: 145 IAKEYNIEKSCDKYMNVDVVKQ 210
           +  + N+ + C+K+M +DV+KQ
Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233


>AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical
           protein K07D4.6 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +1

Query: 367 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLT 483
           G+TE  S+   T      +TEPT   ST    T ++PTS+ T
Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTST 298


>Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical
           protein F14F3.3 protein.
          Length = 453

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 109 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVK-QFMEMYKMGM 237
           I+ PT      ++    NIE S D  +N+D+ K +F + ++ GM
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGM 315


>U40060-7|AAA81145.2|  391|Caenorhabditis elegans Hypothetical
           protein F38B6.7 protein.
          Length = 391

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -3

Query: 335 NIEVLSVVEDSEDFDGFFHLELVGVDEVSPRGSMPILYIS 216
           N+ +       + F+  F+   VG++++S   SMPI Y++
Sbjct: 163 NMHLCCKTSTLDSFENVFYETKVGINKMSSNLSMPIFYVT 202


>L10986-2|AAK84523.2|  667|Caenorhabditis elegans Abnormal cell
           migration protein10, isoform a protein.
          Length = 667

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -3

Query: 308 DSEDFDGFFHLELVGVDEVSPRGSMPILYISMNCLTTSTFMYLSQLFSMLYSLAISLMSS 129
           D+ DF   + +++    +V P+  +  +  SMN +  S    L +L   L +L   L SS
Sbjct: 2   DTYDFPDPYPVQIRARPQVPPKPPIDTVRYSMNNIKESADWQLDELLEELEALETQLNSS 61

Query: 128 N 126
           N
Sbjct: 62  N 62


>AL132949-25|CAB61103.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.29 protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -3

Query: 446 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 282
           GQV  L+V   E   S ++  + + + F +  ++P E     ++V+  +DF G F
Sbjct: 51  GQVPVLSVDGFEIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGSF 104


>AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 2 protein.
          Length = 900

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = -3

Query: 242 GSMPILYISMNCLTTSTFMYLSQLFSMLYSLAISLMSSNMV 120
           G   +LY ++     +T +++ ++  +L+ L +S+M  NM+
Sbjct: 719 GEFTVLYRNLALCPANTMVWIGKVVFILFELFVSIMQFNML 759


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,022,360
Number of Sequences: 27780
Number of extensions: 268794
Number of successful extensions: 652
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)