Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0483
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.075
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 30 0.30
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 27 1.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.1
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 27 2.8
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 26 3.7
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 26 3.7
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 3.7
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 3.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 5.0
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 6.5
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 6.5
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.9 bits (69), Expect = 0.075
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 310 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 489
+ SE+T + T E +E+ RE I LRS L D + VE + E + E+
Sbjct: 974 LASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKEL 1033
Query: 490 YKAIED 507
K +ED
Sbjct: 1034 AKQLED 1039
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 337 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK 453
I+A + L A+ E +E+ E +NE R+K+ E +K
Sbjct: 1592 ILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQK 1630
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.9 bits (64), Expect = 0.30
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = +1
Query: 325 TNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 495
T N I++ + + + HEE + ELR++++++++ E+ ++ E+Y+
Sbjct: 85 TLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQ 141
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 562 DSFFLRVLVALCRPAVVIYLR 500
DS +L LV LCRP V Y+R
Sbjct: 323 DSIWLNFLVVLCRPKNVSYVR 343
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 189 VFSGESARRGTGTPTGSAXITSYAR--PPFDISWQRISVALVSTSMASTFNRQ 37
V E+A P A + S A+ P+D+ + + VA S++ +NRQ
Sbjct: 576 VHKNENAGTARRAPQSGAFVASKAKYSSPYDLPEEIVQVAQQKRSVSQNYNRQ 628
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 343 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDR 510
A +E + ++E +EA +NE R L+ LEG ++ L++ Q + YK E R
Sbjct: 5 AVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESR 62
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 120 ARPPFDISWQRISVALVSTSMASTFNRQRLRNSXIASDD 4
A PF ISW + S A+TF++ +L N+ + D+
Sbjct: 469 ASEPFSISWPQNPSISGSVHSATTFDKAQLSNTEDSYDN 507
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 26.2 bits (55), Expect = 3.7
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +1
Query: 310 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLT--LEQQTA 483
++S IV +DA+++ RE R R K +L+ + R+T ++ T
Sbjct: 953 LKSNTDGICIVLLDIEIDAQLQAEGLAREVINRVQRLRKKSNLQVTDDVRMTYKIKNDTI 1012
Query: 484 EVYKAIEDR*PQLADKARREPSRRMNRASARNI 582
+ A++ L K R P + A NI
Sbjct: 1013 GLESAVDSN-EALFSKVLRRPIEKETGADESNI 1044
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 319 EQTNNFIVATKEA-LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 486
+Q VA ++A +E K E + + + SR+K + +E TRL + Q E
Sbjct: 460 KQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIE 516
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 352 EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 474
E L K+++ ++++ INEL R+K + V + T+++
Sbjct: 530 EGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDE 570
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 416 APVSRIILRALRRPG*PWNSRPRKCTRPSKIDDHSWPTKRDENP 547
AP ++ +A P +RP K T P K DD +W K P
Sbjct: 908 APAKEVVEKAPSPPA----TRP-KSTTPQKFDDDAWANKPVTEP 946
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 590 VXSMFRADARFILLEGSRRALSASCGH 510
+ S+FRA +F +L G ++ + + GH
Sbjct: 1088 INSLFRAGIKFWMLTGDKKETAINIGH 1114
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 316 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 495
SEQT A + + K E E L++ KD+ ++K LE++ + K
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDYKHALKKRITALEEEKNRLIK 450
Query: 496 AI 501
I
Sbjct: 451 EI 452
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,827,422
Number of Sequences: 5004
Number of extensions: 28735
Number of successful extensions: 121
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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