Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0483
(610 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 38 0.008
SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06) 31 0.97
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 30 1.3
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 2.9
SB_26762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 3.9
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 29 3.9
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_36688| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 28 5.1
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 28 5.1
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042) 28 6.8
SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 310 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 489
I EQ +E + KME +EKR++Y+ L++RL + VE+ R T+E+
Sbjct: 189 IAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEEIQMFQ 248
Query: 490 YKAIEDR 510
K +E++
Sbjct: 249 RKILEEK 255
>SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +1
Query: 343 ATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRLTLEQQTAEV-YKA--IEDR 510
A ++AL+A +E R+ + ELR ++ + E +E+ R+ E+Q AE+ Y+ E +
Sbjct: 52 AIRDALNAAEAKAQEDRKQALEELRKKMNEEREQCLEQARIRAEEQMAEIRYRCEIAEKK 111
Query: 511 *PQLA-DKARREPSRRMNRASAR 576
+LA +K +E S + A+ R
Sbjct: 112 RARLAWEKYMKEKSDALKEAAER 134
>SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06)
Length = 241
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 421 RLKDHLEGVEKTRLTLEQQTAEVYKAIEDR*PQLADKARREPSRRMNR 564
RL +E + K+ +L+QQ A+ + + +L DKA E R +NR
Sbjct: 16 RLATEIEELTKSSASLKQQIADTHTMLTGFNQELNDKAIEETKREINR 63
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/83 (21%), Positives = 43/83 (51%)
Frame = +1
Query: 307 RIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 486
R ++ Q + + ++ + + + H EK EA NE++ + K+ L+ +++ +E++ E
Sbjct: 444 RKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQQGKEWLKQDKESHKQIEEREKE 503
Query: 487 VYKAIEDR*PQLADKARREPSRR 555
K++ D +L D ++ R
Sbjct: 504 C-KSLRDEVRKLRDNLSKQDLSR 525
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/84 (21%), Positives = 38/84 (45%)
Frame = +1
Query: 343 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDR*PQL 522
+ KE +M T +EK + + ++L+D L K++ Q+ +E Y+A+++ Q
Sbjct: 423 SNKEKEYKRMATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQQ 482
Query: 523 ADKARREPSRRMNRASARNIEXTS 594
+ ++ + R E S
Sbjct: 483 GKEWLKQDKESHKQIEEREKECKS 506
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 319 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRLTLEQQTAEVYK 495
E+ + + L+ E++RE + E ++ +D +E +EK R L + AE+ +
Sbjct: 76 EERQRMLQEKSDWLEQVERQMEQEREVFAKE-KAEFQDQIENQIEKEREILAKARAEIQE 134
Query: 496 AIEDR*PQLADKARREPSRRMNR 564
+E + Q D +E M R
Sbjct: 135 QMEGQIGQERDILAKEKEEFMER 157
>SB_26762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 571 QTLDSFFLRVLVA-LCRPAVVIYLRWPCTLPRSAVPGSTWSSQRP 440
+T+++F L + V + R V+Y +PC + S PG +RP
Sbjct: 42 RTVENFLLALFVNHVGRSCEVVYQHFPCLISNSCSPGDPLVLERP 86
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 349 KEALDAKMETHEEKREAYI-NELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDR*PQLA 525
+EAL+A+M+T ++ EA + + R ++ L+ E+ + E E+ + E +
Sbjct: 271 REALEAEMQTAIQEHEAMLMRQEIQRRQEELQRFEEMQHREEMMRQEMLQQQEMEMRRRD 330
Query: 526 DKARREPSRRMNRASARNIEXTSFAK 603
++ R E RR R AR+ E F K
Sbjct: 331 EEMRMEEMRR--REEARHHEEMMFRK 354
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 367 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDR*PQLADK-ARRE 543
+ME+ +EK E+ + ELR++L D LE + T +E++ E+ E +L ++ A+ E
Sbjct: 118 EMESEQEKHESELEELRAQL-DKLENSD-TESLVEERMKELKANYEREVEELKERLAKGE 175
Query: 544 PSRRMNRASAR 576
R + + R
Sbjct: 176 SDARDSELTER 186
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 349 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 483
K+ D+ E H+E ++ + E K H+E ++ T + +EQQ A
Sbjct: 1422 KKVQDSSNEIHKENQD--LREELKMAKRHIESLKSTLIQVEQQAA 1464
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = +1
Query: 343 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDR*PQL 522
A +E K + ++EKRE + ELR + ++ +EK + ++ E + E R +L
Sbjct: 1624 ARQEEQTKKYKAYQEKREKDVAELREK----VQSLEKELMETSEKLREDLRGSEKREEEL 1679
Query: 523 ADKARREPSRRMNRASARNIEXTSFAK 603
K + E N+A + I S K
Sbjct: 1680 --KLKLEAGESNNQAIDKKIAELSAEK 1704
>SB_36688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 577 FAQTLDSFFLRVLVALCRPAVVIYLRWPCTLPRSAVPGSTWSS 449
+ + ++SF R +V CR +V+ L W L SA+ +TWS+
Sbjct: 96 YFKIVNSFRHRSVVTKCRVVIVVVLIWLLAL-ISALAQTTWSN 137
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/58 (22%), Positives = 34/58 (58%)
Frame = +1
Query: 349 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDR*PQL 522
+E ++ T E EA +++L + EG+ +++++L++ +E++ +ED+ +L
Sbjct: 447 QEDIERHQLTKERLHEA-VSDLLELTRGETEGLRESQISLDENWSELWALLEDKEEEL 503
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +1
Query: 385 EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDR*PQLADKARREPSRRMNR 564
E+ + +E +RL+D E ++++ E + E+++ I+ QLA+ + +R++
Sbjct: 1815 EREKLETDETNTRLRDDRERLDRSSANFEHENQELHRQIQILQQQLAE-TEQSHARKLVE 1873
Query: 565 ASARN 579
++R+
Sbjct: 1874 VTSRH 1878
>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
Length = 440
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 355 ALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 489
AL K + + +N+ +L + +EG++ T +TL+QQ ++
Sbjct: 235 ALQKKYSDELKSSQDELNDFVIQLDEEVEGMQSTIMTLQQQIKDI 279
>SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1214
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +1
Query: 316 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 495
+E +NF+VA + A M++ E + + + RSR +H ++++ Q
Sbjct: 1132 AETGSNFLVAVLNNMQASMQSSNELLKELVIQKRSRSPNHEPRSKRSKANPSAQ-QRASP 1190
Query: 496 AIEDR*PQLADKARREPSRRMN 561
D P+ + KA +N
Sbjct: 1191 TTSDEEPETSQKASSSRQMTLN 1212
>SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 322 QTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYK 495
QT I+ E ME + + E EL +L+ K T+L L Q+TAE YK
Sbjct: 401 QTQILILQVHEDYRKLMEQKQAEEERCRKELEEKLQTLERDSHKYRTKLELAQKTAETYK 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,712,315
Number of Sequences: 59808
Number of extensions: 260173
Number of successful extensions: 2410
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2410
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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