BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0480
(780 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 3.5
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 25 3.5
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 24 4.6
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 24 4.6
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 24 6.1
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.6 bits (51), Expect = 3.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 226 GEVHVRIRVYFSPDANYQDDQSRNGKQKIEAKHEVLYTGHSTF 98
G+V +++R + D D S K H +YTG S F
Sbjct: 733 GQVRIQLRDHLGSDTVAVDGSSIPPLGKFPVIHYEMYTGESFF 775
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.6 bits (51), Expect = 3.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 226 GEVHVRIRVYFSPDANYQDDQSRNGKQKIEAKHEVLYTGHSTF 98
G+V +++R + D D S K H +YTG S F
Sbjct: 734 GQVRIQLRDHLGSDTVAVDGSSIPPLGKFPVIHYEMYTGESFF 776
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 24.2 bits (50), Expect = 4.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 426 RFGYAQPERFHYSISGRQER 485
++ YAQP+R H S+ G Q++
Sbjct: 4 QYQYAQPQRQHPSLVGPQQQ 23
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 24.2 bits (50), Expect = 4.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 426 RFGYAQPERFHYSISGRQER 485
++ YAQP+R H S+ G Q++
Sbjct: 4 QYQYAQPQRQHPSLVGPQQQ 23
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.8 bits (49), Expect = 6.1
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 426 RFGYAQPERFHYSISG--RQERPEDH*YH 506
++ YAQP+R H S+ G Q++ + H H
Sbjct: 75 QYQYAQPQRQHPSLVGPQLQQQQQQHQQH 103
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,121
Number of Sequences: 2352
Number of extensions: 14215
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -