Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0478
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    44   2e-06
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    27   0.12 
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    25   0.86 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   3.5  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   3.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   4.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.6  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   6.0  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   6.0  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   6.0  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   6.0  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 23/72 (31%), Positives = 38/72 (52%)
 Frame = +1

Query: 250 QNITVRDFDHFVNHKEFFPVEIDALFGGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPF 429
           ++I +RDF  F N +     E        L  ++ ++WR +R+ LSP FT  K++ M   
Sbjct: 92  KDILIRDFSKFAN-RGLGVFERTEPLSPHLLNLEVERWRPLRSRLSPIFTSGKLKEMFYL 150

Query: 430 MIDISKNIVEYL 465
           +I+ S N+  YL
Sbjct: 151 IIECSLNLETYL 162



 Score = 32.3 bits (70), Expect = 0.004
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
 Frame = +2

Query: 32  LYVYKKIHY-FYDARGVKYQPGIPVLG---NILKSSLGTGHFWEDIDKIYKAFPGERYIG 199
           LY Y    + F+ +RGV     +P  G   +++     T HF +DI   Y+ +  E  +G
Sbjct: 18  LYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDI---YEKYKNEPMVG 74

Query: 200 YIEGTTPILMIKDP 241
                +P L++ DP
Sbjct: 75  LYATRSPFLLLNDP 88


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 12/62 (19%), Positives = 30/62 (48%)
 Frame = +1

Query: 328 GGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMIDISKNIVEYLKGHQLEDVDVDDLM 507
           G  L +    KWR+ R  ++P F  + ++  +      ++++VE ++    ++ D  + M
Sbjct: 123 GDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYM 182

Query: 508 PD 513
            +
Sbjct: 183 SE 184


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 134 TGHFWEDIDKIYKAFPGERYI 196
           T H W    +IYKA  G R+I
Sbjct: 469 TLHHWHHCPEIYKAIEGIRFI 489


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 212 CLRYNLCTSHQEMLYISY 159
           C  ++ C+SH    +ISY
Sbjct: 114 CRNFSTCSSHPTAAFISY 131


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 212 CLRYNLCTSHQEMLYISY 159
           C  ++ C+SH    +ISY
Sbjct: 113 CRNFSTCSSHPTAAFISY 130


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 101 PVFLVGT*LLLHRRSNVFSCKRINNTQXVWLSK 3
           PV  V   +LLH +   F CK I +T  ++  K
Sbjct: 9   PVLFVIINVLLHGQVICFVCKDITSTSALYRLK 41


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
 Frame = +2

Query: 38  VYKKIHY--FYDARGVKYQ----PGIPVLGNILKSSL 130
           +Y+ IH     + RG + Q     GI VLGNI+++S+
Sbjct: 317 IYEAIHTGSVINTRGERIQLTEKNGIDVLGNIMEASI 353


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 137 QCPMSFSEYYREPVFLVGT*LLLHRRSNVFSCK 39
           Q   SFS  Y E V++    L +H R++   CK
Sbjct: 12  QAKKSFSCKYCEKVYVSLGALKMHIRTHTLPCK 44


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 101 VLGNILKSSLGTGHFWEDIDKI 166
           VLG++    L T H W+  D+I
Sbjct: 4   VLGSLFLLLLSTSHGWQIRDRI 25


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +3

Query: 39  FTRKYIT-STMQEESSTNQEYRFSVIF*KAHWALVIFGRILIRYI 170
           FT   +T S +   +  N  +R  V    A W  V+F ++L R++
Sbjct: 305 FTMVLVTLSVVVTIAVLNVNFRSPVTHRMARWVRVVFIQVLPRFL 349


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 101 VLGNILKSSLGTGHFWEDIDKI 166
           VLG++    L T H W+  D+I
Sbjct: 4   VLGSLFLLLLSTSHGWQIRDRI 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,422
Number of Sequences: 438
Number of extensions: 3950
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)