Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0478
(665 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52400.1 68418.m06501 cytochrome P450 family protein similar ... 35 0.056
At1g67110.1 68414.m07635 cytochrome P450, putative similar to Cy... 35 0.056
At5g38450.1 68418.m04648 cytochrome P450 family protein similar ... 34 0.098
At2g26710.1 68415.m03204 cytochrome P450, putative 33 0.13
At4g27710.1 68417.m03983 cytochrome P450 family protein contains... 32 0.30
At3g14610.1 68416.m01850 cytochrome P450, putative similar to GB... 32 0.30
At2g46950.1 68415.m05864 cytochrome P450 family protein similar ... 31 0.52
At5g44316.1 68418.m05426 ATP-binding-cassette transporter, putat... 30 1.2
At4g04770.1 68417.m00699 ATP-binding-cassette transporter (ABC1)... 30 1.6
At1g24340.1 68414.m03070 monooxygenase family protein similar to... 29 2.1
At3g14620.1 68416.m01851 cytochrome P450, putative similar to GB... 29 3.7
At2g25600.1 68415.m03066 potassium channel protein, putative sim... 29 3.7
At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot... 29 3.7
At3g55400.1 68416.m06153 methionyl-tRNA synthetase / methionine-... 28 6.4
At1g12860.1 68414.m01494 basic helix-loop-helix (bHLH) family pr... 27 8.5
>At5g52400.1 68418.m06501 cytochrome P450 family protein similar to
Cytochrome P450 72A1 (SP:Q05047) (cytochrome P450 lxxii
hydroxylase) (ge10h) [Catharanthus roseus]
Length = 519
Score = 34.7 bits (76), Expect = 0.056
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 301 FPVEIDALFGGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMIDISKNIVE 459
F + + +FG L M++ D W R ++PAF +++M M++ N+++
Sbjct: 141 FKKDREPMFGTGLVMVEGDDWTRHRHIITPAFAPLNLKVMTNMMVESVSNMLD 193
>At1g67110.1 68414.m07635 cytochrome P450, putative similar to
Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
Length = 512
Score = 34.7 bits (76), Expect = 0.056
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 328 GGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMIDISKNIVEYLKGHQLEDVDVDDLM 507
G L M + W R +PAFT +++ M++ +K + E L+ E+V++ + M
Sbjct: 142 GRGLLMANGEAWHHQRHMAAPAFTRDRLKGYAKHMVECTKMMAERLRKEVGEEVEIGEEM 201
>At5g38450.1 68418.m04648 cytochrome P450 family protein similar to
cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]
Length = 518
Score = 33.9 bits (74), Expect = 0.098
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 328 GGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMIDISKNIVEYLK---GHQLEDVDVD 498
G L M W R +PAFTG +++ M++ + +VE L+ G +V++
Sbjct: 141 GRGLLMANGQDWHHQRHLAAPAFTGERLKGYARHMVECTSKLVERLRKEVGEGANEVEIG 200
Query: 499 DLM 507
+ M
Sbjct: 201 EEM 203
>At2g26710.1 68415.m03204 cytochrome P450, putative
Length = 520
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +1
Query: 280 FVNHKEFFPVEIDALFGGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMIDISKNIVE 459
F E P+ + L G L +K +KW R +SP F ++L++P ++ ++V+
Sbjct: 126 FYEKNEAHPL-VKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLVPVVLKSVTDMVD 184
Query: 460 YLKGHQLEDVDVD 498
E+ +V+
Sbjct: 185 KWSDKLSENGEVE 197
>At4g27710.1 68417.m03983 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 518
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 310 EIDALFGGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMIDISKNIVE 459
E+ LFG L ++ D W R L+PAF+ +++ M M D + I E
Sbjct: 135 EVFILFGKGLSFIQGDDWIRHRRILNPAFSMDRLKAMTQPMGDCTLRIFE 184
>At3g14610.1 68416.m01850 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 512
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 322 LFGGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMIDISKNIV 456
L G L K DKW R ++PAF K++ M+P +V
Sbjct: 134 LLAGGLASYKGDKWASHRRIINPAFHLEKIKNMIPAFYHCCSEVV 178
>At2g46950.1 68415.m05864 cytochrome P450 family protein similar to
cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
contains Pfam profile: PF00067: Cytochrome P450
Length = 572
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 310 EIDALFGGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLPFMID 438
EI L G L + W R L+PAF+ K++LM M+D
Sbjct: 190 EILKLSGNGLIFVNGLDWVRHRRILNPAFSMDKLKLMTQLMVD 232
>At5g44316.1 68418.m05426 ATP-binding-cassette transporter, putative
similar to ATP-binding-cassette transporter (ABC1)
described in PMID:11156608
Length = 470
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 164 SYQYPPKNDQCPMSFSEYYR 105
S+ Y PKN +CPM S Y+R
Sbjct: 254 SFCYIPKNTRCPMPLSSYFR 273
>At4g04770.1 68417.m00699 ATP-binding-cassette transporter (ABC1)
Identical to the protein described in PMID:11156608 and
note that sequence was not deposited into GenBank by the
authors.
Length = 557
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 164 SYQYPPKNDQCPMSFSEYYR 105
S+ Y PKN +CPM S Y+R
Sbjct: 268 SFCYIPKNTRCPMPISTYFR 287
>At1g24340.1 68414.m03070 monooxygenase family protein similar to
polyketide hydroxylases from several bacterial species;
contains Pfam:PF01360 [Monooxygenase]
Length = 707
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 427 FMIDISKNIVEYLKGHQLEDVDVDDLMP 510
F++ + K ++ L GH+L D+DV D+ P
Sbjct: 345 FVLQMCKMLIFNLVGHELSDLDVADIKP 372
>At3g14620.1 68416.m01851 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 515
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 322 LFGGSLFMMKDDKWRDMRTTLSPAFTGSKMRLMLP 426
LF + + + +KW R ++P+F K+++M+P
Sbjct: 139 LFATGVALYEGEKWSKHRKIINPSFHLEKLKIMIP 173
>At2g25600.1 68415.m03066 potassium channel protein, putative
similar to potassium channel [Lycopersicon esculentum]
GI:8980432; member of the 1 pore, 6 transmembrane
(1P/6TM- Shaker-type) K+ channel family, PMID:11500563;
Shaker Pollen Inward K+ Channel (SPIK) PMID:11825875
Length = 888
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 50 IHYFYDARGVKYQPGIPVLGNILKSSLGTGHFWEDIDKIY 169
+ Y D+ G++ Q I L ++SS+ F+E +DKIY
Sbjct: 358 LRYRTDSEGLQQQEIIDSLPKAIRSSISHYLFYEVVDKIY 397
>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related protein 2
(PCAT2) contains Pfam domains PF02135: TAZ zinc finger
and PF00569: Zinc finger, ZZ type; identical to cDNA
p300/CBP acetyltransferase-related protein 2 GI:12597460
Length = 1691
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 303 KEFFMVHEMVEVSHCDVLMISGS 235
++F MVH +HC +LM+SG+
Sbjct: 1387 EDFIMVHLQPSCTHCCILMVSGN 1409
>At3g55400.1 68416.m06153 methionyl-tRNA synthetase /
methionine--tRNA ligase / MetRS (cpMetRS) identical to
methionyl-tRNA synthetase MEtRS [Arabidopsis thaliana]
GI:2266985
Length = 616
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 422 NISRILEPVNAGLKVVLMSRHLSSFIMKRLPPNKASISTGKNSLWFTKWSKSLTV 258
N L+P N L S +SF + P + S+GK +L+ T S+ TV
Sbjct: 11 NALSFLKPFNTPLNTKPFSFRRNSFRFSKKLPYYSQFSSGKRALYCTSSSQESTV 65
>At1g12860.1 68414.m01494 basic helix-loop-helix (bHLH) family
protein / F-box family protein contains Pfam profiles:
PF00646 F-box domain, PF00010 helix-loop-helix
DNA-binding domain
Length = 828
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 428 NGNISRILEPVNAGLKVVLMSRHLSSF-IMKRLPPNKAS 315
NG+I EP N +KVV + H +F ++ ++ P AS
Sbjct: 297 NGSIYWFTEPYNGEIKVVALDIHTETFRVLPKINPAIAS 335
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,930,335
Number of Sequences: 28952
Number of extensions: 279646
Number of successful extensions: 668
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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