Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0476
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   4.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.5  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   5.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.5  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   5.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.3  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 41  SSLKNHYFHCFITYSVGRK 97
           SS    +FHC+     GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 463 ERLAATSQLSXW*LFWHLXIKTLY 392
           ++   T Q + + LFWH+   T+Y
Sbjct: 28  DKTYVTRQKNIYELFWHVDQPTVY 51


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
          protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 20 VGDRFARSSLKNHYFHCFI 76
          + +  A   L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 463 ERLAATSQLSXW*LFWHLXIKTLY 392
           ++   T Q + + LFWH+   T+Y
Sbjct: 28  DKTYVTRQKNIYELFWHVDQPTVY 51


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
          protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 20 VGDRFARSSLKNHYFHCFI 76
          + +  A   L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 255 YRCTAPVKLPAW 220
           +R  AP K+PAW
Sbjct: 61  FRFKAPQKIPAW 72


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 255 YRCTAPVKLPAW 220
           +R  AP K+PAW
Sbjct: 61  FRFKAPQKIPAW 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,919
Number of Sequences: 438
Number of extensions: 3453
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)