Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0474
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.1  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   1.9  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   2.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.4  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    24   5.8  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -2

Query: 383 ATVACTSVFESSG*AAGSSTLISADFASASGISDDFASGTFSS 255
           A+ A  +    S  AA +++    DF++A+ +++ F S  FSS
Sbjct: 566 ASQAAAAAAAISAAAAAANSSFKPDFSTAAAVANSFKSEQFSS 608


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +2

Query: 245 EVKTKKKSRKQNHPRFP---MLKQNLLILKWKNQLLSLKIQKLKY 370
           E+K KK +   N P  P   +L+QNL   + KN+ L  ++ +L++
Sbjct: 20  ELKQKKSATGTNLPSSPEMLILRQNLEETRKKNESLQEQLTQLRW 64


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +2

Query: 173 AIPEAKKDDIAPEDSDIAKPETVPEVKTKKKSRKQ 277
           A+PEA  D I PE    A PE VPEV +    R Q
Sbjct: 650 AVPEAVLDAI-PE----AMPEAVPEVSSTPVRRSQ 679


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
 Frame = +2

Query: 155 SNDEVPAIPEAKKDDIAPEDSDIAKPETVPEVKTKK------KSRKQNHPRFPMLKQNLL 316
           SND  P     +  D    + D+A  +T+PEVK  +       ++ + H     L  NL 
Sbjct: 532 SNDRSPN----QNSDSTENNEDLAYLDTLPEVKLVEVTSNIWGTKFKIHGLAKTLPANLG 587

Query: 317 ILKWKNQLLSLKIQKLKYKLPSLK 388
            + +K  LL L+ +++K  +  L+
Sbjct: 588 QVTYKTSLLHLQPRQMKLVITELR 611


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 16/64 (25%), Positives = 33/64 (51%)
 Frame = +2

Query: 176 IPEAKKDDIAPEDSDIAKPETVPEVKTKKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKI 355
           + EA ++  +P +       ++ + K KK  +KQN PR     + LLI    ++ L+  +
Sbjct: 77  VREAVENIPSPRNGPNINEGSINKRKKKKSKKKQNKPR--KRPEALLISDCTSEELAKLL 134

Query: 356 QKLK 367
           +++K
Sbjct: 135 KEMK 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,527
Number of Sequences: 2352
Number of extensions: 9684
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)