Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0474
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   1.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   7.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   7.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   7.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   7.1  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +2

Query: 266 SRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 394
           S     P F ML QN+L    + + L  +  + + ++P +KF+
Sbjct: 412 STSMRDPAFYMLYQNILSYFLRYKKLQPQYSQSELQMPGVKFE 454


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 292 ESRMILLPGLFLRFHFRNGFRFRDIG 215
           ES  +LLP ++LR++  +G R   +G
Sbjct: 249 ESEDVLLPSVYLRWNLTSGERVGLVG 274


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -1

Query: 345  LSSWFFHFNISRFC 304
            +S+W +H N+++ C
Sbjct: 1674 MSTWGYHHNVNKHC 1687


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 266 SRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 394
           S     P F ML Q +L    + + L  +  + + ++P +KF+
Sbjct: 412 STSMRDPAFYMLYQKILSYFLRYKKLQPQYSQSELQMPGVKFE 454


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 17/69 (24%), Positives = 25/69 (36%)
 Frame = +1

Query: 199 YSPRRLRYRETGNRS*SENEEKVPEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQAT 378
           Y  +  RY +  N      EE+    + S   + E KS   + E    +    +     T
Sbjct: 12  YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNEREYRKYRETSKERSQDRT 71

Query: 379 VAEISKEEK 405
             E SKE K
Sbjct: 72  ERETSKEPK 80


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 17/69 (24%), Positives = 25/69 (36%)
 Frame = +1

Query: 199 YSPRRLRYRETGNRS*SENEEKVPEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQAT 378
           Y  +  RY +  N      EE+    + S   + E KS   + E    +    +     T
Sbjct: 12  YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNEREYRKYRETSKERSQDRT 71

Query: 379 VAEISKEEK 405
             E SKE K
Sbjct: 72  ERETSKEPK 80


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 407 GFSSFEISATVACTSVFESSG 345
           G ++  ++ TV CTS   SSG
Sbjct: 146 GGANLNLNGTVNCTSSIASSG 166


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 182 EAKKDDIAPEDSDIAKPETVPEVKTKKKSRKQNHPRFPML 301
           E K +D+    +D  +    P V TK+   ++   R P L
Sbjct: 601 ERKYEDVCVLKTDTNQSCPSPPVTTKRDGTQETEERLPPL 640


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,932
Number of Sequences: 438
Number of extensions: 2683
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)