Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0473
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118990-1|AAM50850.1|  618|Drosophila melanogaster LP02703p pro...    30   2.4  
AE014296-859|AAF47909.1|  618|Drosophila melanogaster CG11349-PA...    30   2.4  
U31961-18|AAA84417.1|  642|Drosophila melanogaster protein ( Dro...    29   4.1  
AY119141-1|AAM51001.1|  411|Drosophila melanogaster RE44625p pro...    29   4.1  
AE014297-2248|AAF55347.1|  630|Drosophila melanogaster CG10328-P...    29   4.1  

>AY118990-1|AAM50850.1|  618|Drosophila melanogaster LP02703p
           protein.
          Length = 618

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 89  KVFLFKNNDH*PPLYYKETLNVSPPKSLI*YYHCHWREK 205
           KV   K  +H  P YYKE  +  P K  + +YH H+ +K
Sbjct: 58  KVVYHKVEEHEEPKYYKEHQHEEPKKQRVDHYH-HYDKK 95


>AE014296-859|AAF47909.1|  618|Drosophila melanogaster CG11349-PA
           protein.
          Length = 618

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 89  KVFLFKNNDH*PPLYYKETLNVSPPKSLI*YYHCHWREK 205
           KV   K  +H  P YYKE  +  P K  + +YH H+ +K
Sbjct: 58  KVVYHKVEEHEEPKYYKEHQHEEPKKQRVDHYH-HYDKK 95


>U31961-18|AAA84417.1|  642|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 642

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 257 NKPCFKM-ASERPCFFDDISLANDSDNIKLMTLAGKHL 147
           N+ CF + AS RPC  + + + ND+D +   TL  K L
Sbjct: 411 NEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSL 448


>AY119141-1|AAM51001.1|  411|Drosophila melanogaster RE44625p
           protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 257 NKPCFKM-ASERPCFFDDISLANDSDNIKLMTLAGKHL 147
           N+ CF + AS RPC  + + + ND+D +   TL  K L
Sbjct: 180 NEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSL 217


>AE014297-2248|AAF55347.1|  630|Drosophila melanogaster CG10328-PA
           protein.
          Length = 630

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 257 NKPCFKM-ASERPCFFDDISLANDSDNIKLMTLAGKHL 147
           N+ CF + AS RPC  + + + ND+D +   TL  K L
Sbjct: 399 NEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSL 436


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,984,718
Number of Sequences: 53049
Number of extensions: 437129
Number of successful extensions: 844
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)