Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0473
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28742-3|AAA68333.3|  837|Caenorhabditis elegans Hypothetical pr...    28   6.6  
DQ407523-1|ABD85015.1|  856|Caenorhabditis elegans OGA-1c protein.     28   6.6  
DQ407522-1|ABD85014.1|  854|Caenorhabditis elegans OGA-1b protein.     28   6.6  
DQ407521-1|ABD85013.1|  870|Caenorhabditis elegans OGA-1d protein.     28   6.6  
Z48334-5|CAA88312.1|  424|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>U28742-3|AAA68333.3|  837|Caenorhabditis elegans Hypothetical
           protein T20B5.3 protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 639 IMHQRARREAVLNIIPYICIGHVERILVCQ 550
           ++H+RA   A  NIIP++C G  E   +C+
Sbjct: 640 LLHRRATNFADRNIIPFLCSG-AEHNFLCE 668


>DQ407523-1|ABD85015.1|  856|Caenorhabditis elegans OGA-1c protein.
          Length = 856

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 639 IMHQRARREAVLNIIPYICIGHVERILVCQ 550
           ++H+RA   A  NIIP++C G  E   +C+
Sbjct: 657 LLHRRATNFADRNIIPFLCSG-AEHNFLCE 685


>DQ407522-1|ABD85014.1|  854|Caenorhabditis elegans OGA-1b protein.
          Length = 854

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 639 IMHQRARREAVLNIIPYICIGHVERILVCQ 550
           ++H+RA   A  NIIP++C G  E   +C+
Sbjct: 657 LLHRRATNFADRNIIPFLCSG-AEHNFLCE 685


>DQ407521-1|ABD85013.1|  870|Caenorhabditis elegans OGA-1d protein.
          Length = 870

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 639 IMHQRARREAVLNIIPYICIGHVERILVCQ 550
           ++H+RA   A  NIIP++C G  E   +C+
Sbjct: 673 LLHRRATNFADRNIIPFLCSG-AEHNFLCE 701


>Z48334-5|CAA88312.1|  424|Caenorhabditis elegans Hypothetical
           protein F10B5.5 protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 142 DTKCFPAKVINLILSLSLAREMSSKKHGRSDAI 240
           D KC    +I+ + SL + RE SS +   SDAI
Sbjct: 242 DEKCMVFVLIDEVESLGMCRESSSSRSEPSDAI 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,716,815
Number of Sequences: 27780
Number of extensions: 236994
Number of successful extensions: 433
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)