Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0472
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8D355 Cluster: ApbA protein; n=1; Wigglesworthia gloss...    36   0.74 
UniRef50_UPI00006CCA7F Cluster: hypothetical protein TTHERM_0028...    34   3.0  
UniRef50_A0DXR3 Cluster: Chromosome undetermined scaffold_69, wh...    34   3.0  
UniRef50_A4L200 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_Q8I316 Cluster: Putative uncharacterized protein PFI066...    33   9.2  
UniRef50_A3EXT2 Cluster: Polyhomeotic-like protein 2-like protei...    33   9.2  

>UniRef50_Q8D355 Cluster: ApbA protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           ApbA protein - Wigglesworthia glossinidia brevipalpis
          Length = 300

 Score = 36.3 bits (80), Expect = 0.74
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +1

Query: 10  VFNHLLFIIFLNKNNF*SRCTGCRFRKRRQVRMFSGNILQRNINF 144
           ++NH+L++IF  K+NF S     +  KR ++   +G I+  + NF
Sbjct: 230 LYNHILYVIFSTKDNFSSMLQDIKNLKRSEIDQINGVIINESKNF 274


>UniRef50_UPI00006CCA7F Cluster: hypothetical protein
           TTHERM_00283730; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00283730 - Tetrahymena
           thermophila SB210
          Length = 1345

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = -3

Query: 595 NDEKPLYFTIRSDSMFAQCHFCNISESGYLNSERA*AVLFKTCFFNSHRTTKNNNCQK 422
           ND   +Y    S  +  QC +CN    GY N++      +    +   +   N+ CQK
Sbjct: 483 NDYSQIYIPCGSTQIDGQCQYCNYGSYGYKNADNKIICTYNYSQYFCQQFNLNHECQK 540


>UniRef50_A0DXR3 Cluster: Chromosome undetermined scaffold_69, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_69,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1410

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -3

Query: 511 YLNSERA*AVLFKTCF-FNSHRTTKNNNCQKIKIRDKIMYIAIY-KNEFVI*FYLLNRNT 338
           Y N E    +L + C   N     KNNN   IKI+D++M    + +N + + F LL +N 
Sbjct: 273 YSNDETIQVLLIQRCIKSNLKYLQKNNNSNIIKIQDRVMIERYFEQNLYKLYFLLLQQNQ 332

Query: 337 YSLEF 323
             L F
Sbjct: 333 SKLSF 337


>UniRef50_A4L200 Cluster: Putative uncharacterized protein; n=1;
           Gryllus bimaculatus nudivirus|Rep: Putative
           uncharacterized protein - Gryllus bimaculatus nudivirus
          Length = 611

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 19  HLLFIIFLNKNNF*SRCTGCRFRKRRQVRMFSGNILQRNINFP-FFCHNVQNFKIENDV 192
           ++L+    N  N  S    C       +RMF  NILQ NI FP F+ HN+  +K  N++
Sbjct: 234 NILYQFVKNYTNIESAINNCN---SIYLRMFQ-NILQNNIRFPKFYIHNLPKYKSINEI 288


>UniRef50_Q8I316 Cluster: Putative uncharacterized protein PFI0665w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI0665w - Plasmodium falciparum
           (isolate 3D7)
          Length = 1231

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 304 LQFY*LKTLNYKYSYLINK-IKLQIHFYKLRYT*FYLEFLFFD 429
           L F   KT NY   +LIN+ IK  +HF  L +T  +L+F+  D
Sbjct: 327 LSFLSKKTTNYTSEFLINELIKKMVHFIILNFTKTFLKFVQSD 369


>UniRef50_A3EXT2 Cluster: Polyhomeotic-like protein 2-like protein;
           n=2; Neoptera|Rep: Polyhomeotic-like protein 2-like
           protein - Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 236

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -3

Query: 598 NNDEKPLYFTIRSDSMFAQCHFCNISESG-YLNSERA*AVLFKTCFFNSHRTTKNNNCQK 422
           N++++P     ++DS FA+C  CN    G +  S+R  +      F   +  T+N NC K
Sbjct: 53  NDEDEPSPKKQKTDSEFARCEGCNADLKGKFRKSKRFCSNQCSKRFSKRYSKTENGNCSK 112


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,248,160
Number of Sequences: 1657284
Number of extensions: 12186777
Number of successful extensions: 23563
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23557
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)