Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0469
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.16 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.16 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.6  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.0  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 301 EFKYKMEMEIKDE-NLRNSVPFVRQLSTDSVKTKTEY 408
           E K+ M+  IK+   L  SVPF+ ++S   ++TKT Y
Sbjct: 344 ELKF-MDRVIKESLRLYPSVPFISRVSGSEIQTKTGY 379


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 301 EFKYKMEMEIKDE-NLRNSVPFVRQLSTDSVKTKTEY 408
           E K+ M+  IK+   L  SVPF+ ++S   ++TKT Y
Sbjct: 344 ELKF-MDRVIKESLRLYPSVPFISRVSGSEIQTKTGY 379


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
 Frame = +1

Query: 316 MEMEIKDENLRNSVPFVRQLSTDSVKTKTEYDN-EDGTPYKSTTQKLFLWTQLLAAFAVS 492
           +E+ IK++     +PF   ++T    +   +DN E+  P  ++     +W  + AA+A  
Sbjct: 222 LEVAIKEDREAGLIPFY-VVATLGTTSSCTFDNLEELGPVCNSNN---IWLHVDAAYA-- 275

Query: 493 VGSMNADFHLGHITCCANNEYNFGHNKGXIHGWGLMPYSCRSLW 624
            GS        ++    +   +F  N    H W L+ + C ++W
Sbjct: 276 -GSSFICPEFRYLMKGIDRADSFNFNP---HKWLLVNFDCSTMW 315


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 301 EFKYKMEMEIKDENLRNSVPFVRQLSTDSVKTKTEYDNEDGT 426
           E KY      +   L  SVPF+ + +++   TKT     +GT
Sbjct: 43  ELKYTKRCIKETLRLFPSVPFISRYASEDFVTKTGNTIPEGT 84


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 203  PVSDRS*WAPEYPGIHMKLRGKCWLLT 123
            P SD+S +A     +H   + K WLL+
Sbjct: 1958 PASDKSAFADFVKELHEAFKPKGWLLS 1984


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 76  SWSQIRPGAFETNALSVN 129
           SWSQ RPGA +     +N
Sbjct: 530 SWSQKRPGAGKFTPEDIN 547


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 285 DQFRKRIQIQNGNGNQG 335
           D   K ++  NGNG +G
Sbjct: 388 DHLAKHVKTHNGNGKKG 404


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,549
Number of Sequences: 336
Number of extensions: 3561
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)