Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0469
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.1  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   9.4  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   9.4  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 406 YDNEDGTPYKSTTQKLFLWTQLLAAFAVS 492
           Y+N++G+    T +    WT +  AF +S
Sbjct: 197 YENKNGSVILDTARCSMKWTLIEHAFEIS 225


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 207 CSGIGS*LVGTRVPWDPHEV 148
           CSG+G   +  R+P D  EV
Sbjct: 780 CSGLGVEEIPRRIPMDATEV 799


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 80  HECGITALHPLVRDGFVRFHPGIK 9
           H CG     P +  G +R H G K
Sbjct: 46  HLCGKAFSRPWLLQGHIRTHTGEK 69


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/62 (20%), Positives = 26/62 (41%)
 Frame = +1

Query: 271 QQLRQISLGNEFKYKMEMEIKDENLRNSVPFVRQLSTDSVKTKTEYDNEDGTPYKSTTQK 450
           ++  Q S  NE +Y+   E   E  R+     R   +  + + +     +   YK+  +K
Sbjct: 276 REREQKSYKNEREYRKYRETSKERFRDRRERERSKESKIISSLSNKTIHNNNNYKNYNKK 335

Query: 451 LF 456
           L+
Sbjct: 336 LY 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,269
Number of Sequences: 438
Number of extensions: 3851
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)