Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0468
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   2.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.1  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   5.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.4  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 358 DILALLRAYRPRSINPLDEV-PSKLRAVVVNGQH 456
           D+L L   YRP   NP   V  SK  AVV  G++
Sbjct: 88  DVLVLSHTYRPPENNPRWAVDASKKVAVVATGRY 121


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 28  PDTVQQYPETVANARXQRSGRSDPLLRSEETP*PE 132
           P T Q+ PE+V +   +  GRS   L+S + P P+
Sbjct: 391 PTTSQENPESVTDEEIRNIGRS---LKSRKVPGPD 422


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 472  GRHLTFPGNCRYDWRTTTSIE 534
            G+ L+ PG+C  D+R T  IE
Sbjct: 950  GQSLSGPGSCLEDFRATPFIE 970


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 479 TSPSQETVATIGARPRR*KLHAANPTSNGNPSSYLEV 589
           T+P+  T  T   RPRR   +A +   N  P  Y  V
Sbjct: 324 TTPATTTTTTTTPRPRRYPTNAGHKVMNA-PKEYYPV 359


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 450 STHLHVRRSPPHLPRKLSLRLAHDHVDRNFTLLIQLQTETQA 575
           ++HL   R+PP L R++  R+  D    + +    + TET +
Sbjct: 384 TSHLRGSRTPPELDREVLERIVTDLFPDHNSFDWPMPTETSS 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,206
Number of Sequences: 2352
Number of extensions: 11749
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)