Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0468
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    46   7e-05
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    46   7e-05
AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-P...    29   4.7  
EU000366-1|ABS19623.1|  562|Drosophila melanogaster truncated cr...    29   8.2  
AF288223-1|AAG01337.2|  751|Drosophila melanogaster Crossveinles...    29   8.2  
AE013599-3194|AAF46719.2|  751|Drosophila melanogaster CG15671-P...    29   8.2  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 424  KLRAVVVNGQHIFTFDGRHLTFPGNCRY 507
            +LR  VV+G+HIFTFDG +  +PGNC+Y
Sbjct: 2785 ELRGHVVDGKHIFTFDGLNFAYPGNCKY 2812



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/69 (31%), Positives = 37/69 (53%)
 Frame = +2

Query: 8    EKILEVTQILYSNIQKLLPTQXSRDLAEAIHSYVQKKLRNQKCDDEKELRVVYQKLITAV 187
            EK  E+T  L+  I  L  T  + +  + +H Y+  KL+ +  D+EK +  + Q LI AV
Sbjct: 2650 EKATELTNSLFDQINILPQTPETSEFLQKLHDYLIAKLKQEHIDNEKYIEELGQLLIKAV 2709

Query: 188  TSLVQFLRT 214
             S+   +R+
Sbjct: 2710 RSIWVSIRS 2718


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 424  KLRAVVVNGQHIFTFDGRHLTFPGNCRY 507
            +LR  VV+G+HIFTFDG +  +PGNC+Y
Sbjct: 2785 ELRGHVVDGKHIFTFDGLNFAYPGNCKY 2812



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/69 (31%), Positives = 37/69 (53%)
 Frame = +2

Query: 8    EKILEVTQILYSNIQKLLPTQXSRDLAEAIHSYVQKKLRNQKCDDEKELRVVYQKLITAV 187
            EK  E+T  L+  I  L  T  + +  + +H Y+  KL+ +  D+EK +  + Q LI AV
Sbjct: 2650 EKATELTNSLFDQINILPQTPETSEFLQKLHDYLIAKLKQEHIDNEKYIEELGQLLIKAV 2709

Query: 188  TSLVQFLRT 214
             S+   +R+
Sbjct: 2710 RSIWVSIRS 2718


>AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-PB,
            isoform B protein.
          Length = 1662

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 446  TVNTSSRSTVATSPSQETVATIGARPRR*KLHAANPTSNGNPSS 577
            TV++S+  T + S S  +V TIGA P    L   NP SN NP++
Sbjct: 1379 TVSSSTGITPSISNSS-SVVTIGALPAI--LRGGNPLSNANPNA 1419


>EU000366-1|ABS19623.1|  562|Drosophila melanogaster truncated
           crossveinless 2 protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 439 VVNGQHIFTFDGRHLTFPGNCRY 507
           V    H  TFDG+  +F G+C+Y
Sbjct: 385 VFGDPHFRTFDGKFFSFQGSCKY 407


>AF288223-1|AAG01337.2|  751|Drosophila melanogaster Crossveinless 2
           protein.
          Length = 751

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 439 VVNGQHIFTFDGRHLTFPGNCRY 507
           V    H  TFDG+  +F G+C+Y
Sbjct: 385 VFGDPHFRTFDGKFFSFQGSCKY 407


>AE013599-3194|AAF46719.2|  751|Drosophila melanogaster CG15671-PA
           protein.
          Length = 751

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 439 VVNGQHIFTFDGRHLTFPGNCRY 507
           V    H  TFDG+  +F G+C+Y
Sbjct: 385 VFGDPHFRTFDGKFFSFQGSCKY 407


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,701,120
Number of Sequences: 53049
Number of extensions: 549154
Number of successful extensions: 2258
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2258
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)