Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0467
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 30 6.6
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 30 6.6
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 30 6.6
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 30 6.6
AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein. 30 6.6
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 30 6.6
AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid anti... 30 6.6
BC065377-1|AAH65377.1| 254|Homo sapiens FOXH1 protein protein. 30 8.7
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SSGIVSRLSSHLS*LKTMLSLCTXETVSLLH*ATMAGLPTGTAK-TXPV--QESAGNSFR 483
SS + S++ + K ++ CT E VSL+ + L T PV QE + +
Sbjct: 1692 SSALFSKVLERQNMCKDLIDPCTSEKVSLIDMVQRSTLQENTGMWLLPVRPQEGGRITLK 1751
Query: 484 CGRTTSLLQ 510
CGR S+L+
Sbjct: 1752 CGRNISILR 1760
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SSGIVSRLSSHLS*LKTMLSLCTXETVSLLH*ATMAGLPTGTAK-TXPV--QESAGNSFR 483
SS + S++ + K ++ CT E VSL+ + L T PV QE + +
Sbjct: 1692 SSALFSKVLERQNMCKDLIDPCTSEKVSLIDMVQRSTLQENTGMWLLPVRPQEGGRITLK 1751
Query: 484 CGRTTSLLQ 510
CGR S+L+
Sbjct: 1752 CGRNISILR 1760
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SSGIVSRLSSHLS*LKTMLSLCTXETVSLLH*ATMAGLPTGTAK-TXPV--QESAGNSFR 483
SS + S++ + K ++ CT E VSL+ + L T PV QE + +
Sbjct: 1692 SSALFSKVLERQNMCKDLIDPCTSEKVSLIDMVQRSTLQENTGMWLLPVRPQEGGRITLK 1751
Query: 484 CGRTTSLLQ 510
CGR S+L+
Sbjct: 1752 CGRNISILR 1760
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SSGIVSRLSSHLS*LKTMLSLCTXETVSLLH*ATMAGLPTGTAK-TXPV--QESAGNSFR 483
SS + S++ + K ++ CT E VSL+ + L T PV QE + +
Sbjct: 1692 SSALFSKVLERQNMCKDLIDPCTSEKVSLIDMVQRSTLQENTGMWLLPVRPQEGGRITLK 1751
Query: 484 CGRTTSLLQ 510
CGR S+L+
Sbjct: 1752 CGRNISILR 1760
>AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein.
Length = 3060
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SSGIVSRLSSHLS*LKTMLSLCTXETVSLLH*ATMAGLPTGTAK-TXPV--QESAGNSFR 483
SS + S++ + K ++ CT E VSL+ + L T PV QE + +
Sbjct: 1366 SSALFSKVLERQNMCKDLIDPCTSEKVSLIDMVQRSTLQENTGMWLLPVRPQEGGRITLK 1425
Query: 484 CGRTTSLLQ 510
CGR S+L+
Sbjct: 1426 CGRNISILR 1434
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SSGIVSRLSSHLS*LKTMLSLCTXETVSLLH*ATMAGLPTGTAK-TXPV--QESAGNSFR 483
SS + S++ + K ++ CT E VSL+ + L T PV QE + +
Sbjct: 1692 SSALFSKVLERQNMCKDLIDPCTSEKVSLIDMVQRSTLQENTGMWLLPVRPQEGGRITLK 1751
Query: 484 CGRTTSLLQ 510
CGR S+L+
Sbjct: 1752 CGRNISILR 1760
>AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid antigen 1
eB protein.
Length = 3060
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 313 SSGIVSRLSSHLS*LKTMLSLCTXETVSLLH*ATMAGLPTGTAK-TXPV--QESAGNSFR 483
SS + S++ + K ++ CT E VSL+ + L T PV QE + +
Sbjct: 1366 SSALFSKVLERQNMCKDLIDPCTSEKVSLIDMVQRSTLQENTGMWLLPVRPQEGGRITLK 1425
Query: 484 CGRTTSLLQ 510
CGR S+L+
Sbjct: 1426 CGRNISILR 1434
>BC065377-1|AAH65377.1| 254|Homo sapiens FOXH1 protein protein.
Length = 254
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 333 PGNNPGRCPRSLASRAGRRTPCSSS 259
P PG CPR L SR G PCS S
Sbjct: 13 PSTRPGPCPRCLPSRMG---PCSGS 34
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,377,094
Number of Sequences: 237096
Number of extensions: 1667254
Number of successful extensions: 3009
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3006
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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