Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0467
         (673 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g29060.1 68415.m03532 scarecrow transcription factor family p...    29   2.8  
At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein si...    29   2.8  
At3g30550.1 68416.m03866 hypothetical protein includes At2g05890...    28   4.9  
At3g63330.1 68416.m07125 protein kinase family protein contains ...    28   6.5  
At1g67490.1 68414.m07686 alpha-glucosidase I (GCS1) / KNOPF (KNF...    28   6.5  

>At2g29060.1 68415.m03532 scarecrow transcription factor family
           protein 
          Length = 1336

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 393 LAFTLSDNGGVAYGDSKDXTSSRVSWKFIPLWENNKSTS 509
           LA  +S  GG +Y  S   TSS   W F  L ENN+ +S
Sbjct: 116 LAQLVSSPGGSSYASSTTTTSSDSQWSFDCL-ENNRPSS 153


>At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein
           similar to leucine zipper protein GI:10177020 from
           [Arabidopsis thaliana] contains Pfam domain PF03081:
           Exo70 exocyst complex subunit;
          Length = 599

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 150 VIVKMLRQDFVEGCAFVGVQRRREETQDNNSGLHLR 43
           + V+M+   F + C+ V   RRRE  +++ S LHLR
Sbjct: 192 IAVRMVAGGFAKECSRVYSSRRREFLEESLSRLHLR 227


>At3g30550.1 68416.m03866 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 509

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 46  KMKSAVVVLCLFAASLYAD-EGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGEL 222
           K K+   +LC+   +++   +      +  +++ ++++  DYD+ V+ S LI  +    +
Sbjct: 398 KGKTFQFLLCVQRENIFGGYDSFTVARVYTDNIADEIVQEDYDAYVDPSSLISIEQDSLM 457

Query: 223 ITNVVN 240
           +TN V+
Sbjct: 458 LTNGVD 463


>At3g63330.1 68416.m07125 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 376

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +1

Query: 133 EHLYNDVIIADYDSAVERSKLIYTDNKGELITNVV-----NNLIRKTR*TAWSTPTSSG 294
           E  YND+ +  +   V  SKL+YT  + E+ +          ++R ++   W   T SG
Sbjct: 65  ESRYNDIWLVFHHEGVSLSKLMYTVEEAEISSEKAEEASHGQILRPSKWWTWLKTTESG 123


>At1g67490.1 68414.m07686 alpha-glucosidase I (GCS1) / KNOPF (KNF)
           identical to alpha-glucosidase I (GI:16506680,
           GI:13398928) [Arabidopsis thaliana]
          Length = 852

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 181 ERSKLIYTDNKGELITNVVNN 243
           E+SK IYT+ +  LI NVV N
Sbjct: 790 EKSKAIYTELRSNLIRNVVRN 810


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,984,437
Number of Sequences: 28952
Number of extensions: 236521
Number of successful extensions: 552
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)