Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0466
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0190 - 23110152-23112137                                         31   1.2  
01_06_1201 - 35380338-35380496,35381200-35381322,35381521-353820...    30   2.0  
10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787           29   3.6  
10_08_0191 + 15617500-15617568,15617608-15617808                       29   4.7  

>05_05_0190 - 23110152-23112137
          Length = 661

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 22/90 (24%), Positives = 45/90 (50%)
 Frame = -3

Query: 317 VHLESMSYIGFSAIHCARCFSVVLYVQLFFYQSLYEQRVRVHLGPSEESSFVAAYQPMTV 138
           VH  S   + F        F++V  + +   + L + RV   L P  + +FVAA +   +
Sbjct: 286 VHASSWEELEFDIARWIPAFNMVFRILIPSERRLCD-RVFDGLAPFGDLAFVAAVRTQAL 344

Query: 137 QLAIYLLLLRANTISPELQWMVLELYFALK 48
           QL  +   + +++ +PE  + V+++Y A++
Sbjct: 345 QLISFGDAISSSSRAPERLFRVVDMYEAVR 374


>01_06_1201 -
           35380338-35380496,35381200-35381322,35381521-35382066,
           35382285-35382392,35382695-35383225,35383614-35383743,
           35384225-35385081,35385303-35385408,35387119-35387230,
           35389255-35389347,35389723-35389771,35389859-35389897,
           35390671-35390757,35391613-35391873,35391957-35392166,
           35392413-35393507
          Length = 1501

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 26  LSSFLQQSLEQNKA-PKPSIATPVKSYSHEAKVNKWLAEQSSVDTRRRSSTPRLAPDEHV 202
           ++ F  + L+QNK  P P +A  V+   +E  V    A Q+       S TPRL P+ H 
Sbjct: 1   MAIFRSEGLKQNKCLPGPHLALSVR---YEKCVALLAAYQTLAFPGFDSQTPRLHPESHF 57

Query: 203 P 205
           P
Sbjct: 58  P 58


>10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787
          Length = 366

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 9/42 (21%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +1

Query: 298 DIDSKWTESIKE-HVKLPQDVRSQRHSPMQSSGSTERKKGRP 420
           ++ S++ E ++    K+ Q++R ++H+P  ++ + + + G+P
Sbjct: 167 ELTSEFDEKLESMRAKIRQEIREEQHNPQAAAAAAQEELGKP 208


>10_08_0191 + 15617500-15617568,15617608-15617808
          Length = 89

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +2

Query: 44  QSLEQNKAPKPSIATPVKSYSHEAKVNKWLAEQSSVDTRRRSSTPR 181
           Q LEQ+   + S ++  +  S+  + N WL ++S   T RR+S PR
Sbjct: 45  QRLEQSWLAEDSESSLERQLSNSWRTNSWLDDESG--TERRNSHPR 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,640,423
Number of Sequences: 37544
Number of extensions: 309915
Number of successful extensions: 839
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)