BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0466
(703 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein. 26 1.00
AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. 25 2.3
Y17717-1|CAA76832.1| 101|Anopheles gambiae cE5 protein protein. 24 4.0
DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domai... 24 4.0
AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor O... 24 5.3
AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembran... 24 5.3
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 7.0
>AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein.
Length = 441
Score = 26.2 bits (55), Expect = 1.00
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 87 VAMDGFGALFCSKDC 43
+A DGFGA FC +C
Sbjct: 359 IAPDGFGAFFCFGEC 373
>AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein.
Length = 437
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 141 CSASHLF-TFASCEYDFTGVAMDGFGALFCSKDC 43
C L+ +F ++ +A +G+GA +CS +C
Sbjct: 336 CRIQQLYVSFKDLQWHEWIIAPEGYGAYYCSGEC 369
>Y17717-1|CAA76832.1| 101|Anopheles gambiae cE5 protein protein.
Length = 101
Score = 24.2 bits (50), Expect = 4.0
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +1
Query: 289 PMYDIDSKWTESIKEHVKLPQDVRSQRHSPM----QSSGSTERKKGRPP 423
P YD + ES+K H P D + P + T R GR P
Sbjct: 31 PTYDEEDFDEESLKPHSSSPSDDGEEEFDPSLLEEHADAPTARDPGRNP 79
>DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 24.2 bits (50), Expect = 4.0
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 402 TQERQTSKSRFFICKCVIIKLSFKSKL 482
T + K+ F+C CV+ + F S+L
Sbjct: 26 TGRKTVRKNAVFVCDCVVTIIVFLSRL 52
>AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor
Or83b protein.
Length = 478
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 174 LLAWPQMNTYPLFIE 218
L W Q NT+PLF E
Sbjct: 103 LAIWNQTNTHPLFAE 117
>AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 478
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 174 LLAWPQMNTYPLFIE 218
L W Q NT+PLF E
Sbjct: 103 LAIWNQTNTHPLFAE 117
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 7.0
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +2
Query: 2 APQASSKELSSFLQQSLEQNKAPKPSIATPVKSYSHEAKVNKWLAEQSSVDTRRRSSTPR 181
AP A S +L L + AP+PS+A V S + V A S T R + PR
Sbjct: 64 APSAVSSQLQRPQPTVLAASPAPQPSLAPVVPS----SVVTAPPARPSQPPTTRFAPEPR 119
Query: 182 LAPDEHVPVV 211
A + VP V
Sbjct: 120 -AEVKFVPSV 128
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,866
Number of Sequences: 2352
Number of extensions: 11872
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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