Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0466
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   2.8  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.5  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 461 LDDNTFADEESRLGGLPFLRSVDPEDCIGECL 366
           +DD    DE+  LG LP       +  +G+CL
Sbjct: 84  VDDEANVDEDIMLGLLPDQLQERAQSVMGKCL 115


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 461 LDDNTFADEESRLGGLPFLRSVDPEDCIGECL 366
           +DD    DE+  LG LP       +  +G+CL
Sbjct: 84  VDDEANVDEDIMLGLLPDQLQERAQSVMGKCL 115


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 194 HLGPSEESSFVAAYQPMTVQLAIYLLLLRANTI 96
           HLG    SS ++ Y P+ V +  Y  + RA  I
Sbjct: 203 HLGYLIFSSTISFYLPLFVMVFTYYKIYRAAVI 235


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 256 LKHLAQWIAENPMYDIDSKW 315
           L+ LA W+  +P YD  + W
Sbjct: 655 LQVLALWLNHSPNYDQVTNW 674


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,931
Number of Sequences: 438
Number of extensions: 3334
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)