Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0465
(606 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 4e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 92 4e-19
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 75 4e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 66 3e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 46 2e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16) 31 0.55
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.55
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_33247| Best HMM Match : Ammonium_transp (HMM E-Value=0) 30 1.7
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.7
SB_39918| Best HMM Match : WAPL (HMM E-Value=1.8) 29 3.9
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 29 3.9
SB_16704| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_37048| Best HMM Match : Phage_tube (HMM E-Value=7.3) 27 8.9
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 126 bits (304), Expect = 1e-29
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYAS 145
Score = 123 bits (297), Expect = 1e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYAS 145
Score = 124 bits (300), Expect = 4e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 130 bits (315), Expect = 6e-31
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 182 bits (443), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 126 bits (304), Expect = 1e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 124 bits (300), Expect = 4e-29
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 344
KRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +3
Query: 417 NREKMTQIMFETFNTPAMYVAIQAVLSLYAS 509
N + M +IMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYAS 108
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 100 bits (239), Expect = 1e-21
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Frame = +3
Query: 249 TEKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPXANRE 425
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 426 KMTQIMFETFNTPAMYVAIQAVLSLYA-SVVPRYVLDS 536
KM ++MFE + +Y+AIQAVL+LYA ++ V+DS
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDS 159
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQR 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA +
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQ 63
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 324 KIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLY 503
K+W H F ++LRV E+ PVLLTEAPLNP NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 504 AS 509
AS
Sbjct: 2189 AS 2190
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 198
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 74.9 bits (176), Expect = 4e-14
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +3
Query: 372 EHPVLLTEAPLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 509
+HPVLLTEAPLNP NREK ++ FETFN PA+++++QAVLSLYA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/76 (35%), Positives = 48/76 (63%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQIMFETFNT 461
PI+ G++ +WD EKI + + ++ HP+L++EA N REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 462 PAMYVAIQAVLSLYAS 509
PA ++ +VL+ +A+
Sbjct: 63 PAFFLCKNSVLTAFAN 78
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 198
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 67 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 213
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 438 IMFETFNTPAMYVAIQAVLSLYAS 509
IMFE FN+PA+YVAIQAVLSLYAS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYAS 24
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 276 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 389
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -1
Query: 195 MAGPSDDRGEYGARSIISCETGLAHTGAIVYYQRGNFLV 79
MA +DD GE G+ SI+S ETGLAHTGAI+ Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16)
Length = 724
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 423 EKMTQIMFETFNTPAMYVAIQAVLSLYASVVPRYVLDSATCLHTYHYEDTISTHLRWTC 599
E +++M FN +A+ L + Y+ ++ C+++ H ++T+++HL TC
Sbjct: 504 ETSSEVMCCRFNLDGSLIAV----GLANGTIKVYLAENGNCVYSLHDQETLNSHLPVTC 558
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 198 GRDGRYGTEGL-VRR*RGTEKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 368
GR G + GL V G+ + L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 369 EEHPVLLTEAPLNPXANRE 425
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = -3
Query: 322 SMSSQLVTIPCSMGYLRVRIPLFSVPRHLRTSPSVPYRPSRPDGGAFRRSRGIRREEHHL 143
+++SQ VT M R +PL S P H++ SP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 142 LRNRPCTYRSHCLLPTRQLP 83
+ P +Y+S +R+ P
Sbjct: 845 --HEPGSYKSPHSEGSRRTP 862
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_33247| Best HMM Match : Ammonium_transp (HMM E-Value=0)
Length = 486
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = -2
Query: 494 EHGLDGDVHGGRVECFEHDLGHLLSVGX-----GVEGSFSEQDGVFLGG 363
E+ L + GR++ F G L++VG +EG FS GVF GG
Sbjct: 324 ENQLTSNCSQGRIQAFSSVYGALIAVGLFAEKDTLEGRFSNSYGVFKGG 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNE 353
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 85 EVAALVVDNGSGMCKAGFAGDDAPRAV 165
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_39918| Best HMM Match : WAPL (HMM E-Value=1.8)
Length = 653
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 372 EHPVLLTEAPLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLYASV--VPRYVLD 533
+ P + A L +T+ +FE P+ V I+A+L +Y+S+ +PRYV +
Sbjct: 452 QSPSVCIRALLQSLGTYSSITRYVFEHNYNPS--VRIRALLGMYSSITTIPRYVFE 505
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 248 ASSPTYESFCPIPTITP*WRGLPTI 174
A+SP Y S P+PT TP PTI
Sbjct: 1222 ATSPPYTSASPVPTTTPSASSSPTI 1246
>SB_16704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = -2
Query: 509 RRVQREHGLDGDVHGGRVECFEHDLGHLLSVGXGVEGSFSEQDGVFLGGDTQLI--VEGM 336
RRV + LD + VEC + +L L V +F+EQ+G D L+ M
Sbjct: 60 RRVMHQRALDVHLIPEEVECLQTNLEKLSEKCRAVIRNFTEQEGEDYQLDQTLVRMCSAM 119
Query: 335 MPNLLHVIPVSDDS 294
+P + DS
Sbjct: 120 VPKFCEEVITKGDS 133
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_37048| Best HMM Match : Phage_tube (HMM E-Value=7.3)
Length = 270
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = +3
Query: 45 LFNNTILIQDVRRGSCRVGSRQWLRYVQGXXXXXXXXXXXIPLDRRKAPPSGRDGRYGTE 224
+FN + +D+ G R + RYV G +PLDR + G YG E
Sbjct: 100 VFNLPLRYRDLTPGD-REAANHVTRYVTGMLFDATPRGC-VPLDRLEETVKGWYDWYGQE 157
Query: 225 GLVRR*RGTEKRGIL 269
G+V G +R +L
Sbjct: 158 GIVGYKGGNVERDLL 172
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 185 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 75
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 256 FSVPRHLRTSPSVPYRPSRPDGGAFRRSRGIRREEHHLLRNRPCTYRSHCLLPTRQL 86
+ P +L ++P + RPS + S LL RP TYR+ LP+ L
Sbjct: 128 YRAPLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPL 184
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,932,773
Number of Sequences: 59808
Number of extensions: 499041
Number of successful extensions: 1458
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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