Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0465
(606 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 182 2e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 182 2e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 182 2e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 180 7e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 9e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 9e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 9e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 179 1e-45
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 179 1e-45
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 161 2e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 155 2e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 155 3e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 111 3e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 2e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 82 3e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 66 2e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 60 8e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 2e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.084
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.7
At1g75800.1 68414.m08805 pathogenesis-related thaumatin family p... 29 1.8
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.8
At3g12650.1 68416.m01575 expressed protein 29 3.2
At2g39130.1 68415.m04807 amino acid transporter family protein b... 28 4.2
At1g66180.1 68414.m07512 aspartyl protease family protein contai... 28 4.2
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 28 5.5
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.3
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2... 27 7.3
At4g01535.1 68417.m00199 hypothetical protein 27 7.3
At1g59990.1 68414.m06758 DEAD/DEAH box helicase, putative (RH22)... 27 7.3
At1g20030.2 68414.m02508 pathogenesis-related thaumatin family p... 27 7.3
At1g20030.1 68414.m02509 pathogenesis-related thaumatin family p... 27 7.3
At5g40760.1 68418.m04946 glucose-6-phosphate 1-dehydrogenase / G... 27 9.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 7e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYAS 147
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (437), Expect = 9e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYAS 147
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYAS 147
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 179 bits (436), Expect = 1e-45
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 179 bits (436), Expect = 1e-45
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNP ANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN PAMYVAIQAVLSLYAS
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYAS 147
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 161 bits (392), Expect = 2e-40
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNP NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFE+F P+MY+ IQAVLSLY+S
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSS 148
Score = 101 bits (243), Expect = 3e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 155 bits (377), Expect = 2e-38
Identities = 74/103 (71%), Positives = 82/103 (79%)
Frame = +3
Query: 201 RDGRYGTEGLVRR*RGTEKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 380
RDG E V G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGE-EGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 381 VLLTEAPLNPXANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 509
VLLTEAP NP ANREKMTQIMFE+F+ PAMYV++Q+VL LY+S
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSS 136
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 246
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEE 48
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 155 bits (375), Expect = 3e-38
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
+ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNP A+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETF P+MY+ +QA LSL+AS
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHAS 102
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 111 bits (267), Expect = 3e-25
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = +3
Query: 249 TEKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREK 428
+E R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 429 MTQIMFETFNTPAMYVAIQAVLSLYA-SVVPRYVLDS 536
M + MFE +N +++ IQAVL+LYA ++ V+DS
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDS 156
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 243
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQIMFET 452
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 453 FNTPAMYVAIQAVLSLYA 506
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 94 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 180
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMT 434
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
++MFE + PA+++A VL+ +A+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFAT 169
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 183
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 65.7 bits (153), Expect = 2e-11
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPXANREKMTQIMFETFN 458
PIE G++ +WD ME + + Y L E +L T+ P A RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 459 TPAMYVAIQAVLSLYA 506
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 94 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 186
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREK 428
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 183
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 60.5 bits (140), Expect = 8e-10
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQIMFET 452
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 453 FNTPAMYVA-IQAVLSLY-ASVVPRYVLDSATC 545
F ++Y+A Q+++ LY AS P +L C
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQC 153
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 189
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPXANREKMTQIMFETFN 458
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 459 TPAMYVAIQAVLS 497
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 243
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.084
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 218 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 81
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 194 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 108
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 383 DGVFLGGDTQLIVEGMMPNLLHVIPVS 303
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At1g75800.1 68414.m08805 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam
profile: PF00314 Thaumatin family
Length = 330
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 278 FEGQDTSFLCASSPTYE-SFCPIP 210
++ Q ++F CA SP Y +FCP P
Sbjct: 227 YDDQSSTFTCAESPNYVITFCPTP 250
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 267 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREK 428
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 267 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREK 428
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 407 VEGSFSEQDGVFLGGDTQLIVEGMMPNL 324
+EG E+D LG +T+ ++EGMM N+
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKNM 126
>At2g39130.1 68415.m04807 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 550
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 468 MYVAIQAVLSLYASVVPRYVLDSATCLHTY 557
M + + +LS Y ++ RY LDS + L TY
Sbjct: 194 MILFVYGLLSFYTGILLRYCLDSESDLETY 223
>At1g66180.1 68414.m07512 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease profile;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]
Length = 430
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 322 SMSSQLVTIPCSMGYLRVRIPLFSVP 245
S+SS T+PCS + RIP F++P
Sbjct: 116 SLSSSFSTLPCSHPLCKPRIPDFTLP 141
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 434 GHLLSVGXGVEGSFSEQDGVFLGGDTQLIVEGMMPN 327
G+ + VG G+ G + GV++GG G PN
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 194 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 72
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g12770.1 68417.m02004 auxilin-related low similarity to
SP|Q27974 Auxilin {Bos taurus}
Length = 909
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 253 SVPRHLRTSPSVPYRPSRPDGGAFRRSR 170
SVPR RT+P P++ S GG+F SR
Sbjct: 677 SVPRQ-RTNPPDPFQDSWNKGGSFESSR 703
>At4g01535.1 68417.m00199 hypothetical protein
Length = 137
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 30 VPTCHLFNNTILIQDVRRGSCRVGSRQWL 116
+ + +L NT +++D + +C GS+ WL
Sbjct: 13 IESLNLLKNTTVLEDQGKWNCEFGSKLWL 41
>At1g59990.1 68414.m06758 DEAD/DEAH box helicase, putative (RH22)
similar to RNA helicase GI:3776015 from [Arabidopsis
thaliana]; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00270: DEAD/DEAH box
helicase; matches EST OAO811-2
Length = 581
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 458 VECFEHDLGHLLSVGXGVEGSFSEQDGVFLGGDTQLIVEGM-MPNLLHVI 312
++C+ + H L + F E GVF+ T G+ +PN+ HVI
Sbjct: 449 IQCYRYHKNHKLDERANILADFRETGGVFV--CTDAAARGVDVPNVSHVI 496
>At1g20030.2 68414.m02508 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 316
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 278 FEGQDTSFLCASSPTYE-SFCPIP 210
++ + ++F CA SP Y +FCP P
Sbjct: 224 YDDKSSTFTCAKSPNYVITFCPSP 247
>At1g20030.1 68414.m02509 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 299
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 278 FEGQDTSFLCASSPTYE-SFCPIP 210
++ + ++F CA SP Y +FCP P
Sbjct: 207 YDDKSSTFTCAKSPNYVITFCPSP 230
>At5g40760.1 68418.m04946 glucose-6-phosphate 1-dehydrogenase / G6PD
(ACG12) idential to glucose-6-phosphate 1-dehydrogenase
(acg12) [Arabidopsis thaliana] GI:5732197
Length = 515
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 326 LLHVIPVSDDSVFDGVFEG---QDTSFLCASSPTYESFCPIPTITP*WRGLPTI 174
L V+P+SDD V G +EG DT +++PT+ + + W G+P I
Sbjct: 303 LQSVVPISDDEVVLGQYEGYRDDDTVPNDSNTPTFATTI-LRIHNERWEGVPFI 355
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,078,897
Number of Sequences: 28952
Number of extensions: 318021
Number of successful extensions: 966
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -